Transcript Information: R_Transcript_175153.p1


Annotated TAIR IDAT1G64380.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23890981-23891988 | Reverse length=335
E-Value3.6E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.091288262679557
Replicate 30.099594511287619
Condition 2: 8 Hour
Replicate 10.10646028237933
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.89834897847538
Replicate 20.38356971983613
Replicate 30.28549180026388


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_175153.p1 GENE.R_Transcript_175153~~R_Transcript_175153.p1 ORF type:5prime_partial len:230 (+),score=42.98,AP2|PF00847.16|2.8e-12 R_Transcript_175153:3-692(+)
GAATGTCAAGTGCCTTGCTTTGCTCTCAAGCCTGTGAAAAAGAAGTTATATAGGGGAGTGAGGCAAAGGCACTGGGGCAAATGGGTGGCTGAAATAAGACTACCTCAGAACAGAATGAGGGTCTGGTTGGGTACCTACGAAACAGCAGAAGCTGCTGCCTATGCGTATGATCGCGCAGCCTATAAGCTAAGAGGGGAGTATGCTCGCTTGAACTTCCCCAATCTCGACGATCCTACTGCTCTAGGTGTTGGAAATTCTGCACGGATAAATGCCCTTAAGGCGGCTGTTGATTCCAAAATCCAAGCGATTTGCCAGAAATTGAAGCGCCAAAGAGCCAACAAAATTGCCAACAACAAGAAGAAACAGCAGGAACAACAACAGCAGAAACAGTCAGTACTTGACAACACCTGTGTTACAAAGAGTGGCAATCAGAGTCATAGTAGTACTACTGAAAATACTACTACTTTGATGAAGGATTCATATTCCTCATCATCTAATTCATCATTGTGTTGCTCTTCCGGAATGATTAATGACAGTACTAGTGGGATCAACAACGAAATGGTGTCTCCAGCTGTTTCTGATTCCACCAGTTATTCTGTGGTAGAACAGGATTTTGGGTTTCTAGACTGTTCCTTAGCAAGAATGCCATCTTTTGATCCAGAGTTGATCTGGGAAGTCCTTGCTAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_175153.p1 GENE.R_Transcript_175153~~R_Transcript_175153.p1 ORF type:5prime_partial len:230 (+),score=42.98,AP2|PF00847.16|2.8e-12 R_Transcript_175153:3-692(+)
ECQVPCFALKPVKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLDDPTALGVGNSARINALKAAVDSKIQAICQKLKRQRANKIANNKKKQQEQQQQKQSVLDNTCVTKSGNQSHSSTTENTTTLMKDSYSSSSNSSLCCSSGMINDSTSGINNEMVSPAVSDSTSYSVVEQDFGFLDCSLARMPSFDPELIWEVLAN*

Click here to download the sequence:
Link to NCBI Protein BLAST