Transcript Information: R_Transcript_175154.p1


Annotated TAIR IDAT2G22200.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:9443422-9444207 | Reverse length=261
E-Value4.4E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47616419881875
Replicate 20.73030610143645
Replicate 30.59756706772572
Condition 2: 8 Hour
Replicate 11.3839836709313
Replicate 21.0694334793611
Replicate 31.8940811082143
Condition 3: 24 Hour
Replicate 10.89834897847538
Replicate 20.47946214979516
Replicate 31.0468032676342


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_175154.p1 GENE.R_Transcript_175154~~R_Transcript_175154.p1 ORF type:5prime_partial len:230 (+),score=45.50,AP2|PF00847.16|2.8e-12 R_Transcript_175154:3-692(+)
GAATGTCAAGTGCCTTGCTTTGCTCTCAAGCCTGTGAAAAAGAAGTTATATAGGGGAGTGAGGCAAAGGCACTGGGGCAAATGGGTGGCTGAAATAAGACTACCTCAGAACAGAATGAGGGTCTGGTTGGGTACCTACGAAACAGCAGAAGCTGCTGCCTATGCGTATGATCGCGCAGCCTATAAGCTAAGAGGGGAGTATGCTCGCTTGAACTTCCCCAATCTCGACAATCCTACTGCTCTAGGTGTTGGAGATTCTGCTCGGATGAATGCTCTTAAGACGGCTGTTGATTCCAAAATCCAAGCGATTTGCCAGAAATTGAAGCGCCAAAGAGCCAACAAAATTGCCAATAACAAGAAGAAACAACAACAACAACAACAGCAACAGCAACAGTCAGTACCTGACAACAGCTGTGATACAAAGAGTGGAAATCAGAGAAATAGTGGAACTACTGAAAATACTACTACTTTGATGAAGGATTCATATTCGTCATCATGTAATTCATCATTCTGTTCTTCCGGAATGATTAATGACAGTACTAGTGGGATCAACAACGAAATGGTGTCTCCAGCTGTTTCTGATTCCACCAGTTATTCTGTGGTAGAACAGGATTTTGGGTTTCTAGACTGTTCCTTAGCAAGAATGCCATCTTTTGATCCAGAGTTGATCTGGGAAGTCCTTGCTAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_175154.p1 GENE.R_Transcript_175154~~R_Transcript_175154.p1 ORF type:5prime_partial len:230 (+),score=45.50,AP2|PF00847.16|2.8e-12 R_Transcript_175154:3-692(+)
ECQVPCFALKPVKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLDNPTALGVGDSARMNALKTAVDSKIQAICQKLKRQRANKIANNKKKQQQQQQQQQQSVPDNSCDTKSGNQRNSGTTENTTTLMKDSYSSSCNSSFCSSGMINDSTSGINNEMVSPAVSDSTSYSVVEQDFGFLDCSLARMPSFDPELIWEVLAN*

Click here to download the sequence:
Link to NCBI Protein BLAST