Transcript Information: R_Transcript_175211.p1


Annotated TAIR IDAT3G49910.1
Annotated Gene NameTranslation protein SH3-like family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18504311-18504751 | Forward length=146
E-Value8E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6949178029382
Replicate 22.0996300416298
Replicate 30.49085866277469
Condition 2: 8 Hour
Replicate 11.0493942120248
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.16398433734074
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_175211.p1 GENE.R_Transcript_175211~~R_Transcript_175211.p1 ORF type:internal len:140 (+),score=12.20,Ribosomal_L26|PF16906.1|1.4e-30,KOW|PF00467.25|5.4e-08,KOW|PF00467.25|3.5e+03 R_Transcript_175211:1-417(+)
CGCTTTAACACCTTAGGCCACGCAATGAAGTTGAATAAGAACGTAACCAGTTCCAGAAGAAAACAAAGAAAGGCAAGATACACTGCTAACACTTTGGAAAGAAGAAGATTGATGAGCTCTGCACTCTCTACCGCTCTCAGAAATGAATATCACAAACGTTCTATCCCTGTCAGAAAGGATGATGAGGTTAAGGTCATTAGAGGAATCCACAGAGGAAAGGAGGGAAAGGTTACCCAAGTCTACAGAAAGAAATGGTGCATCTATATCGAAAAGATCTCCAGAGAAAAGATGGACGGAAAGACCGTTAACATCCCAATTGATCCATCCAATGTTGTTATTACTAAGCTTAAATTGGATAAGTCCCGTCTCAACATTCTTTCTAGAGGAAAAAACGCATCCGAAAAGGGAACTAAGTAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_175211.p1 GENE.R_Transcript_175211~~R_Transcript_175211.p1 ORF type:internal len:140 (+),score=12.20,Ribosomal_L26|PF16906.1|1.4e-30,KOW|PF00467.25|5.4e-08,KOW|PF00467.25|3.5e+03 R_Transcript_175211:1-417(+)
RFNTLGHAMKLNKNVTSSRRKQRKARYTANTLERRRLMSSALSTALRNEYHKRSIPVRKDDEVKVIRGIHRGKEGKVTQVYRKKWCIYIEKISREKMDGKTVNIPIDPSNVVITKLKLDKSRLNILSRGKNASEKGTKY

Click here to download the sequence:
Link to NCBI Protein BLAST