Transcript Information: R_Transcript_175214.p1


Annotated TAIR IDAT5G24880.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8552743-8554074 | Forward length=443
E-Value4E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6527155374773
Replicate 23.2935373202036
Replicate 33.4434965013824
Condition 2: 8 Hour
Replicate 14.4810733236789
Replicate 23.3614397539037
Replicate 35.5759849618182
Condition 3: 24 Hour
Replicate 12.850969525009
Replicate 23.3154964345312
Replicate 32.8611378675683


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_175214.p1 GENE.R_Transcript_175214~~R_Transcript_175214.p1 ORF type:internal len:153 (+),score=37.34 R_Transcript_175214:1-456(+)
CTGCTCCTCCTCATTCATTGGAATTCTCGGCTCAATTTCTTTCACTTCTTCAGCTTTTCTTGTTATTGGTTCTATCTTCTTGTTAATCCCCCACCACCAGTTTCCCCCGAGACATTACCCATCAACTGCACTGTAAAGCAGGTTGAAGACCACAGGGAAGCCAAAATAGAGAACAATGAGGACATAAAGCCAGTGAAGAGTGCAGAGGTTGAAGCCACTCAAGATGTGCAAACAAAACCAACAAAAAATGTTACATTTGAATCAACCAAGGCTGTAGACTCAAGTATAGTGAAAGATGTCGAACTTAACAAGAAGATAGAACCAATAAGAAGAAAAGCTGAAGAAGTGAAAGAAATTGAGCCGAGAATTGCAATGAATGAGGAGGAGCAGAAAATATTCAAGGACATTGAAGAAATGAAATCAAAACTACATGAACTTGAGTCAAAGTTAGGCAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_175214.p1 GENE.R_Transcript_175214~~R_Transcript_175214.p1 ORF type:internal len:153 (+),score=37.34 R_Transcript_175214:1-456(+)
LLLLIHWNSRLNFFHFFSFSCYWFYLLVNPPPPVSPETLPINCTVKQVEDHREAKIENNEDIKPVKSAEVEATQDVQTKPTKNVTFESTKAVDSSIVKDVELNKKIEPIRRKAEEVKEIEPRIAMNEEEQKIFKDIEEMKSKLHELESKLGK

Click here to download the sequence:
Link to NCBI Protein BLAST