Transcript Information: R_Transcript_175336.p1


Annotated TAIR IDAT3G23290.2
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH4
Annotation TypeOrtholog
Chromosome Positionchr3:8326958-8328010 | Forward length=195
E-Value6.1E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3011843818875
Replicate 24.3440621550962
Replicate 38.3728075351454
Condition 2: 8 Hour
Replicate 14.2217008529733
Replicate 23.2384725425165
Replicate 34.0058726886371
Condition 3: 24 Hour
Replicate 16.333188200746
Replicate 24.1068413106592
Replicate 311.019327187197


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_175336.p1 GENE.R_Transcript_175336~~R_Transcript_175336.p1 ORF type:3prime_partial len:145 (+),score=5.94,DUF640|PF04852.8|2.3e-45 R_Transcript_175336:516-947(+)
ATGGATCTCATTTCAGCTAGTACTAATAATCACACTTCCTCAAACACCACCAACCTCCACCATACAATCACTAATTGCTCTCCACCTCCTTCTTCTACTTTATCCTCAACCGCCAGTAGCGGCGGTTTTAGTGGTGGTGGTGGTGGTGGGAGTGGGAGTGGAGGACAGTTGAGTAGGTATGAGAACCAGAAGCGTCGAGACTGGAACACTTTCGGGCAGTACTTACGTAATCACCGCCCTCCGCTGACGTTAGCACGGTGTAGCGGGGCCCACGTGCTTGAATTCTTGAGATATCTGGACCAGTTCGGGAAGACCAAAGTCCACAACCCGCCTTGCCCCTTCTTCGGTCACCCGAACCCGCCTGCCCCCTGCCCGTGCCCGCTTCGGCAGGCTTGGGGCTCCCTCGACGCTCTCATAGGCCGCCTTCGTGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_175336.p1 GENE.R_Transcript_175336~~R_Transcript_175336.p1 ORF type:3prime_partial len:145 (+),score=5.94,DUF640|PF04852.8|2.3e-45 R_Transcript_175336:516-947(+)
MDLISASTNNHTSSNTTNLHHTITNCSPPPSSTLSSTASSGGFSGGGGGGSGSGGQLSRYENQKRRDWNTFGQYLRNHRPPLTLARCSGAHVLEFLRYLDQFGKTKVHNPPCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRA

Click here to download the sequence:
Link to NCBI Protein BLAST