Transcript Information: R_Transcript_17552.p1


Annotated TAIR IDAT1G03350.1
Annotated Gene NameBSD domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:822834-824246 | Reverse length=470
E-Value5.5E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 171.824992097604
Replicate 254.60921184508
Replicate 369.233816770434
Condition 2: 8 Hour
Replicate 155.285349779991
Replicate 263.47281706489
Replicate 370.978495340706
Condition 3: 24 Hour
Replicate 166.814425519193
Replicate 262.951445219069
Replicate 365.564962918598


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17552.p1 GENE.R_Transcript_17552~~R_Transcript_17552.p1 ORF type:complete len:446 (+),score=151.62,BSD|PF03909.13|3.1e-13 R_Transcript_17552:328-1665(+)
ATGAACTTTTTCAATTCCATCTTCGCAGATGATGATCCAGACCCACCAAAATCACCAAACCCTGAATCCCCTTCTTCATCATCATCAAATCCGACCCAAACCCACCAACCCGAATCCCCAATCACTGATGGGTCCGAACAAGTTTGGAGCTTTGGTGGTTTAATCAAGACCCTCCAAGTCAAATCTGATTGGATCGACACCTACAAACGTGATTTGCAGGAATTTGGGTCGGATTTCAAGAAAGAAACTCATGTCTTTCGTGAAGTCGCTGGCAAAAGTCTTGATCTTGGGGCTGCTAAGGCTCAAGTTTCTCTTGAATCTGTTGGTCAAGCTATTGATAGTCTTGGGTCTATAATCTCGAAAGGTAAAGATTCTTTGCTTTCTTTGGACAATGACTTTTCTGATAATATCAATAATAATAATTTGCAAAGTGTTAATAATAGTTCTGAGAGGAAGTATAGTAGATTTGATGCTCAATTAAGTGCTATACAACGTGATTTAAGTACTTTTGTTGAGGACCCTGATGATGTTGATGATTACAAGAAGTGGAAATCTGGGTTTAATTTGAAGGAAAAAAGTGAGGAAATTGATGGGTTGTTGAGATATAATGGGAGTGTTGATGGGATTTATAAGAGGGTAGTGCCTGAAACTGTGGATCATGATGAGTTTTGGTGTCGGTATTATTATCGAGTTCATAGGCTTAAACAAGCTGAGAATGTTAGGGCCAAGTTGGTCAAGAGGGCTATCTCGACAGAGGATGATGAAGAGTTGAGTTGGGATGTTGAAGATGAGGAGGATGAGGAAGAGGGAGATGTGAAGAGGGTTGATGAAGGGTCGGTTTCAAAATCAGGTAATGCTGTTCGGGAAGAGGATAATGAGAATGGAAAGGAGGGTTTGAGTGATCGGGATTTAGGTGTTAAGAGCTCTGTTTCCACTGACCAAAGGGTAGGTATGAAAGACAAGGTGGAGAAAGAGGAGAAGAGTGATATTATTGAATCTACTACCAAGGAAGTGTCGTCGAATAAGGAGGTGCAATCTGAAGAGACTGCTGAAGTGAAAAATGGTGAGGAGTCGAAGAAATCTGAGGAGAAGGTTGCTTCTGAAGGGAAGAAGGAGCCTAGTGAGTCTGGCAAAGATAGTGACATTTCAGTTGTATCTACGCAACCATCGCACGAGGATGATGACATGGGCTGGGATGAGATTGAGGATGTTGGTAGTGGAGATGAAAATAAGGTGGCTGCACGAAGTGGGAGCCCTAATAGGGAGGAATTGCGCAAGCGTCTAAGTGCTGCTGATGAAGATGAAGACTTGAGTTGGGACATTGAAGATGATGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17552.p1 GENE.R_Transcript_17552~~R_Transcript_17552.p1 ORF type:complete len:446 (+),score=151.62,BSD|PF03909.13|3.1e-13 R_Transcript_17552:328-1665(+)
MNFFNSIFADDDPDPPKSPNPESPSSSSSNPTQTHQPESPITDGSEQVWSFGGLIKTLQVKSDWIDTYKRDLQEFGSDFKKETHVFREVAGKSLDLGAAKAQVSLESVGQAIDSLGSIISKGKDSLLSLDNDFSDNINNNNLQSVNNSSERKYSRFDAQLSAIQRDLSTFVEDPDDVDDYKKWKSGFNLKEKSEEIDGLLRYNGSVDGIYKRVVPETVDHDEFWCRYYYRVHRLKQAENVRAKLVKRAISTEDDEELSWDVEDEEDEEEGDVKRVDEGSVSKSGNAVREEDNENGKEGLSDRDLGVKSSVSTDQRVGMKDKVEKEEKSDIIESTTKEVSSNKEVQSEETAEVKNGEESKKSEEKVASEGKKEPSESGKDSDISVVSTQPSHEDDDMGWDEIEDVGSGDENKVAARSGSPNREELRKRLSAADEDEDLSWDIEDDD*

Click here to download the sequence:
Link to NCBI Protein BLAST