Transcript Information: R_Transcript_175620.p1


Annotated TAIR IDAT1G15680.1
Annotated Gene NameF-box family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:5393407-5394639 | Forward length=410
E-Value8E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.207070306179
Replicate 214.182597156201
Replicate 316.299024828031
Condition 2: 8 Hour
Replicate 19.5942211211562
Replicate 210.750423962108
Replicate 39.9484788977121
Condition 3: 24 Hour
Replicate 110.430349918356
Replicate 212.353065676694
Replicate 37.3660544619366


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_175620.p1 GENE.R_Transcript_175620~~R_Transcript_175620.p1 ORF type:complete len:416 (+),score=46.19,DUF1618|PF07762.10|1.9e+02,DUF1618|PF07762.10|3.5e-06,F-box|PF00646.29|3.7e-06 R_Transcript_175620:102-1349(+)
ATGCAGAAATATGGAAGAGCTACAATATCCTGTGCTAGTGCTACCCATTCGGATCCCATTTCCAGTTTACCAGACTCAATTTTGGCTGAGATTCTCACAAGATTACCATCCAAATTCATTTTTCAGCTCAAAAGCATCTCAAAGCGGTGGTTCTCTCTAATCTCAGACCCTGATTTTGCCCAATTATACATCTCAAACATCTCTACTCCACCAGAAACAACCCTTTTTCTCCGGTCAGTGATATTCCCCAAACCCAATTTTTTCAGTTTCAATTCTGCTTTTGTGGGCACCAAAGTTGATAACTTTGGACATAGGAATTTGTTTTCCACCTTAATTGTAAATGGGTTACATCCAAAACCTGTAGAAATTGTGGGTTCTTGTGATGGTTTGTTGCTTTGTTCTGATTCAAGAAATCTTCTTTATTACATTTGCAATCCCATTACTAAAGAAATTGTGTCGACCCCACCATCCCCTTACCCTTGCCACCCTGTTGGGTGTGGTTTAATTTGCAAATTAGAAGGTGGGATTGTGAAATTATATTGCTTAGTATTGATTGATAGAGTTGTTGATTCAGTAGATGCCTTCACTTTTCAGATTTACTCATCTAAGAGTAATGAATGGAGGGTTGTGAAGGCTTCTTGTCCTGGTAAAGTTAGTAGGTTATTTTCTGAGTACTCTTTAAGTCCAGCAATCCCTTACAAGGGAATGTTGCATTGGGTTCATTTAGCTCATGGGATTATCATAGTTTATGATCCCTTAGTTGATTCTACTAGTCAATGTCGTTTTATTGAATTGCCTGGGGAGAAAAGAAGATATGACATGTTCAATAGGGTTTGTAATGTATGTGAAGGGCGGTTGCGATACTTGGAGGTGGAGAATTCCATCATACAAAGGCATACATTTCCTGGAATTCGGATCTGGGTGCTTGATGATCATGAAAAGGGTGAATGGGTATTGGAACACCATGTTGACCGAAGTGTGTTTCGCACCTGTGATGGCTATCTCAAGAGGGATATCCCCTCTATGTCATTCGTGTATCTAATGCCTTTAGCTTTCAATCCCATCAATAAAGATGTAATCTACTTCTGGTGTGCTTTTTGCATTCTGTCTTACCATGTACATAGCAAGAGGCTGACAATAGAAGTGGAGAATTACACTGGCAAGTTACTTTGTTATAAGGATGTGTTTCCATTTGTATGCCCACTGTGGCCTTTGTCAATTCTTAAACCTTTTCAGTGTACAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_175620.p1 GENE.R_Transcript_175620~~R_Transcript_175620.p1 ORF type:complete len:416 (+),score=46.19,DUF1618|PF07762.10|1.9e+02,DUF1618|PF07762.10|3.5e-06,F-box|PF00646.29|3.7e-06 R_Transcript_175620:102-1349(+)
MQKYGRATISCASATHSDPISSLPDSILAEILTRLPSKFIFQLKSISKRWFSLISDPDFAQLYISNISTPPETTLFLRSVIFPKPNFFSFNSAFVGTKVDNFGHRNLFSTLIVNGLHPKPVEIVGSCDGLLLCSDSRNLLYYICNPITKEIVSTPPSPYPCHPVGCGLICKLEGGIVKLYCLVLIDRVVDSVDAFTFQIYSSKSNEWRVVKASCPGKVSRLFSEYSLSPAIPYKGMLHWVHLAHGIIIVYDPLVDSTSQCRFIELPGEKRRYDMFNRVCNVCEGRLRYLEVENSIIQRHTFPGIRIWVLDDHEKGEWVLEHHVDRSVFRTCDGYLKRDIPSMSFVYLMPLAFNPINKDVIYFWCAFCILSYHVHSKRLTIEVENYTGKLLCYKDVFPFVCPLWPLSILKPFQCTT*

Click here to download the sequence:
Link to NCBI Protein BLAST