Transcript Information: R_Transcript_175708.p1


Annotated TAIR IDAT5G44040.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17719896-17721348 | Reverse length=416
E-Value2E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.145163521422
Replicate 22.6595313860644
Replicate 36.108463358974
Condition 2: 8 Hour
Replicate 12.0404887456038
Replicate 22.1615519113146
Replicate 32.6017308555888
Condition 3: 24 Hour
Replicate 19.1065968669893
Replicate 24.852156955927
Replicate 37.952532702906


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_175708.p1 GENE.R_Transcript_175708~~R_Transcript_175708.p1 ORF type:internal len:300 (-),score=83.48 R_Transcript_175708:3-899(-)
GGTTTGCATAATCTTGGTCTAAATTCTGTTGTGATGCTGTTATGTTCCCCTTTTAGGGCGAAGCCAGAAAAGGAGGAGTTGAGCTTGAACAACCAGAGCTTGAATGACCAGGTTAAGCTGGAGGAGCAGTTGAGCTCAGGCACGCGAAAGAAAGCGACTTTCAATTCAAATGTTAAAGAATATGAGCCAATTCCTGTTGATGATGAGGCACCAGTGAATGTAGAGAGCAGTGATAAAGTGGGAGATAAAGGGTTCAATGAGAATTCAACTAAACCAAGCCATTCTCATTCCCTATCAGTGCCTGAAAGTGGTTCGACTGTGTCCAGTTTGGGTTCGTACCCTCCGAATCGTCGGTACCAGAATTGTAGAGAGAGTGATGACGAGGATGAAGAATTACATTGTGAAGTTAGTGATCTGGATGAGGATGAAGATGATGAGAACGATGATGATGATGGGGAAGAGTCATATGATGATGAATACTATGATGATGACTACCACCACCATCAAAGACATGTGCAAGAGTTTTCAACTGGGTCCTTTACATCTATGGAATCGACGACTAAATGCCCCCCGACAGGTGATCCTGTGTTGGACTTGTCACCAGAGATAGCAGCCAAGACTCTAGGGTTCAACTGTGGTGCTCGTGATAGGGCTGGTTATGTTCATTCAGTGTTGAATCCTGTTGAGAACACAACTCAATGGAAAGCTGTGAAAGGAAAAGGAACTACCCCACTGAAACAGCAGAAGGAAAATCTTCAAATGGATCCAAGTGTTAAGCAATTTACATGGAAGTCCAAATCGAAACTGGACGAATTAAATAATAACCATGAAGTGGCAGTTGATGCCAGCCTATCAAACTGGTTGGTTTCCTCTCAGAAAACACCTCCATCAAACAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_175708.p1 GENE.R_Transcript_175708~~R_Transcript_175708.p1 ORF type:internal len:300 (-),score=83.48 R_Transcript_175708:3-899(-)
GLHNLGLNSVVMLLCSPFRAKPEKEELSLNNQSLNDQVKLEEQLSSGTRKKATFNSNVKEYEPIPVDDEAPVNVESSDKVGDKGFNENSTKPSHSHSLSVPESGSTVSSLGSYPPNRRYQNCRESDDEDEELHCEVSDLDEDEDDENDDDDGEESYDDEYYDDDYHHHQRHVQEFSTGSFTSMESTTKCPPTGDPVLDLSPEIAAKTLGFNCGARDRAGYVHSVLNPVENTTQWKAVKGKGTTPLKQQKENLQMDPSVKQFTWKSKSKLDELNNNHEVAVDASLSNWLVSSQKTPPSNK

Click here to download the sequence:
Link to NCBI Protein BLAST