Transcript Information: R_Transcript_175809.p1


Annotated TAIR IDAT5G19540.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6595748-6597724 | Forward length=462
E-Value3E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.93463956695849
Replicate 21.3913211119234
Replicate 30.68996197578772
Condition 2: 8 Hour
Replicate 10.95878386841623
Replicate 21.3470410747702
Replicate 32.1322675126358
Condition 3: 24 Hour
Replicate 10.82980026124232
Replicate 20.73074652950708
Replicate 31.714097354998


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_175809.p1 GENE.R_Transcript_175809~~R_Transcript_175809.p1 ORF type:complete len:332 (+),score=77.05 R_Transcript_175809:160-1155(+)
ATGGTAGCTCACTCTCTCTCCATTCTCTCTCCTATTCCTTCAACCTCATCTTCTCCTTCTTCTACTTCCACCTCCTCAGATTCTCTCCACTCTCCTTACACCCTTCGCTTCTCCAATTTCTCTCTCCGAAACCCTAACCCTAGCCCTAGGGCGCTAAAACGCCCTCACACTATCTCTCCTCCTCCTCGAGTTTCGAGCTTCTTCGGAGCATCATCGTCGCCGGAAAATGACGACGAATCGACGGCGACAACGGCGCCGGAGCAGTTTCTGGAGAACAATTCGATCGCTGATTTCATGAGGTACCGTAAGAAGTTCCCTTGGTCTCTTCTCCAGCCTTTCCTCAAGGTTGATTTGGTCTCTACCATTCACATTGCTGATAAAGAATACTTTGCAACCTTGCAGAAGGAACTTGAACCCTATGATTGTGTTCTTTATGAGATGGTAGCAAGCAGAGAGAGTTTAGAGAATCGAAGAAGTGCAGCAGCTAAAAAGAGGATCAAATCTTCACGCTCACGGGGTTTTAACATTATTGGATTTATCCAGAGACAGATGGCTCGGATACTTACTCTTGATTTCCAGTTGGACTCTCTTGATTACCAGGCTGAGAATTGGTATCATGCTGACTTGGATTTTGAGACCTTCAAAATGCTTCAGATAGAAAGAGGTGAGAATTTCTTCACATTTGCAAGAGATATGACTATTAAATCAACAAAAGCCATGGTGCAGCCCACAATTCCTGAAAATCTTGATCCTTGGAGATCCAAGCTTTTGTGGGCTTCTCGCGTGCTCCCTATGCCACTTGTGGGCCTTCTCATTATTGGAGGCATTTGTACTGATGCTGGAGGTCAGGTCTCTGAATACCCTGAGCTGGATGCTCTGTCCAGGCTTGATTTTGGTGCTGCAATGAAGGTTTTCCTGGCAAAGCGCCTGACATCAGATGAAATGAAGGGTTCATGTCCTTCAGGAGTTGACATTATCGCAGGTTCACACAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_175809.p1 GENE.R_Transcript_175809~~R_Transcript_175809.p1 ORF type:complete len:332 (+),score=77.05 R_Transcript_175809:160-1155(+)
MVAHSLSILSPIPSTSSSPSSTSTSSDSLHSPYTLRFSNFSLRNPNPSPRALKRPHTISPPPRVSSFFGASSSPENDDESTATTAPEQFLENNSIADFMRYRKKFPWSLLQPFLKVDLVSTIHIADKEYFATLQKELEPYDCVLYEMVASRESLENRRSAAAKKRIKSSRSRGFNIIGFIQRQMARILTLDFQLDSLDYQAENWYHADLDFETFKMLQIERGENFFTFARDMTIKSTKAMVQPTIPENLDPWRSKLLWASRVLPMPLVGLLIIGGICTDAGGQVSEYPELDALSRLDFGAAMKVFLAKRLTSDEMKGSCPSGVDIIAGSHK*

Click here to download the sequence:
Link to NCBI Protein BLAST