Transcript Information: R_Transcript_175811.p1


Annotated TAIR IDAT5G19540.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6595748-6597724 | Forward length=462
E-Value8E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21040877181232
Replicate 20.12101614072794
Replicate 30.1320273060297
Condition 2: 8 Hour
Replicate 10.21169335689261
Replicate 20
Replicate 30.73234163886287
Condition 3: 24 Hour
Replicate 10.39696496647327
Replicate 20.25423929556861
Replicate 30.1892308762556


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_175811.p1 GENE.R_Transcript_175811~~R_Transcript_175811.p1 ORF type:3prime_partial len:347 (+),score=83.51 R_Transcript_175811:160-1197(+)
ATGGTAGCTCACTCTCTCTCCATTCTCTCTCCTATTCCTTCAACCTCATCTTCTCCTTCTTCTACTTCCACCTCCTCAGATTCTCTCCACTCTCCTTACACCCTTCGCTTCTCCAATTTCTCTCTCCGAAACCCTAACCCTAACCCTAACCCTAGGCCGCTCAAACGCCCTCACACTCTGTCTCCTCCTCCTCGAGTTTCGAGCTTCTTCGGAGCATCATCGTCGCCGGAAAATGACGACGAATCGACGGCGACAACGGCGCCGGAGCAGTTTCTGGAGAACAATTCGATCGCCGATTTCATGAGATACAAGAAAGAGGCCAATGATGGTGAGTTGCAAACCGCTGTTGTCAGTTACCGTAAGAAGTTCCCTTGGTCTCTTCTCCAGCCTTTCCTCAAGGTTGATTTGGTCTCTACCATTCACATTGCTGATAAAGAATACTTTGCAACCTTGCAGAAGGAACTTGAACCCTATGATTGTGTTCTTTATGAGATGGTAGCAAGCAGAGAGAGTTTAGAGAATCGAAGAAGTGCAGCAGCTAAAAAGAGGATCAAATCTTCACGCTCACGGGGTTTTAACATTATTGGATTTATCCAGAGACAGATGGCTCGGATACTTACTCTTGATTTCCAGTTGGACTCTCTTGATTACCAGGCTGAGAATTGGTATCATGCTGACTTGGATTTTGAGACCTTCAAAATGCTTCAGATAGAAAGAGGTGAGAATTTCTTCACATTTGCAAGAGATATGACTATTAAATCAACAAAAGCCATGGTGCAGCCCACAATTCCTGAAAATCTTGATCCTTGGAGATCCAAGCTTTTGTGGGCTTCTCGCGTGCTCCCTATGCCACTTGTGGGCCTTCTCATTATTGGAGGCATTTGTACTGATGCTGGAGGTCAGGTCTCTGAATACCCTGAGCTGGATGCTCTGTCCAGGCTTGATTTTGGTGCTGCAATGAAGGTTTTCCTGGCAAAGCGCCTGACATCAGATGAAATGAAGGGTTCATGTCCTTCAGGAGTTGACATTATCGCAGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_175811.p1 GENE.R_Transcript_175811~~R_Transcript_175811.p1 ORF type:3prime_partial len:347 (+),score=83.51 R_Transcript_175811:160-1197(+)
MVAHSLSILSPIPSTSSSPSSTSTSSDSLHSPYTLRFSNFSLRNPNPNPNPRPLKRPHTLSPPPRVSSFFGASSSPENDDESTATTAPEQFLENNSIADFMRYKKEANDGELQTAVVSYRKKFPWSLLQPFLKVDLVSTIHIADKEYFATLQKELEPYDCVLYEMVASRESLENRRSAAAKKRIKSSRSRGFNIIGFIQRQMARILTLDFQLDSLDYQAENWYHADLDFETFKMLQIERGENFFTFARDMTIKSTKAMVQPTIPENLDPWRSKLLWASRVLPMPLVGLLIIGGICTDAGGQVSEYPELDALSRLDFGAAMKVFLAKRLTSDEMKGSCPSGVDIIAG

Click here to download the sequence:
Link to NCBI Protein BLAST