Transcript Information: R_Transcript_175812.p1


Annotated TAIR IDAT5G19540.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6595748-6597724 | Forward length=462
E-Value3.6E-212
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.1708060893538
Replicate 24.4550973572397
Replicate 35.2935738142369
Condition 2: 8 Hour
Replicate 18.3848655176491
Replicate 29.7241650023643
Replicate 39.1520725817077
Condition 3: 24 Hour
Replicate 16.1735279940045
Replicate 24.9577997926298
Replicate 35.7938041818258


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_175812.p1 GENE.R_Transcript_175812~~R_Transcript_175812.p1 ORF type:complete len:476 (+),score=107.74 R_Transcript_175812:160-1587(+)
ATGGTAGCTCACTCTCTCTCCATTCTCTCTCCTATTCCTTCAACCTCATCTTCTCCTTCTTCTACTTCCACCTCCTCAGATTCTCTCCACTCTCCTTACACCCTTCGCTTCTCCAATTTCTCTCTCCGAAACCCTAACCCTAGCCCTAGGGCGTTTAAACGCCCTCACACTCTCTCTCCTCCTCGTCGAGTTTCGAGCTTCTTCGGAGCATCATCGTCGCCGGAAAATGACGACGAATCGACGGCGACAACGGCGCCGGAGCAGTTTCTGGAGAACAATTCGATCGCCGATTTCATGAGATACAAGAAAGAGGCCAATGATGGTGAGTTGCAAACCGCTGTTGTCAGTTACCGTAAGAAGTTCCCTTGGTCTCTTCTCCAGCCTTTCCTCAAGGTTGATTTGGTCTCTACCATTCACATTGCTGATAAAGAATACTTTGCAACCTTGCAGAAGGAACTTGAACCCTATGATTGTGTTCTTTATGAGATGGTAGCAAGCAGAGAGAGTTTAGAGAATCGAAGAAGTGCAGCAGCTAAAAAGAGGATCAAATCTTCACGCTCACGGGGTTTTAACATTATTGGATTTATCCAGAGACAGATGGCTCGGATACTTACTCTTGATTTCCAGTTGGACTCTCTTGATTACCAGGCTGAGAATTGGTATCATGCTGACTTGGATTTTGAGACCTTCAAAATGCTTCAGATAGAAAGAGGTGAGAATTTCTTCACATTTGCAAGAGATATGACTATTAAATCAACAAAAGCCATGGTGCAGCCCACAATTCCTGAAAATCTTGATCCTTGGAGATCCAAGCTTTTGTGGGCTTCTCGCGTGCTCCCTATGCCACTTGTGGGCCTTCTCATTATTGGAGGCATTTGTACTGATGCTGGAGGTCAGGTCTCTGAATACCCTGAGCTGGATGCTCTGTCCAGGCTTGATTTTGGTGCTGCAATGAAGGTTTTCCTGGCAAAGCGCCTGACATCAGAGTTCACACAAGTGACAGCAGATGTGGAGGCAAATTCAGTGATCATTGGTGAGAGAAACAAGGCAGCAACAGAAGCACTTAGAAGAGCCATTGATGAAGGCCACAACAGAATTGCCATACTCTATGGAGGTGGGCACATGCCGGATCTAGGGAGACGGTTGAGGGAGGATTTCGACCTGGTCCCATCTCAAGTTCAATGGATAACTGCCTGGTCTATCAGGAAACGGGATTTGAAGAGCAGCTCATTTCCATTTCTGAAGACTATGGCAGAAATCTCTGGCTGGCCCTTGAATCGGTACCAAACCTTGGCGCTTCTCATCTTTTCCTTGGTCCTTGCAGTAGATCTTTGGTTTTGGGAGTTGTTCTTTGGAACAACAGTTAATTGGGTGTCACAAGCTGCGTCAGACGCTTCCCAGTATATTGGCAATGGACCGGCTATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_175812.p1 GENE.R_Transcript_175812~~R_Transcript_175812.p1 ORF type:complete len:476 (+),score=107.74 R_Transcript_175812:160-1587(+)
MVAHSLSILSPIPSTSSSPSSTSTSSDSLHSPYTLRFSNFSLRNPNPSPRAFKRPHTLSPPRRVSSFFGASSSPENDDESTATTAPEQFLENNSIADFMRYKKEANDGELQTAVVSYRKKFPWSLLQPFLKVDLVSTIHIADKEYFATLQKELEPYDCVLYEMVASRESLENRRSAAAKKRIKSSRSRGFNIIGFIQRQMARILTLDFQLDSLDYQAENWYHADLDFETFKMLQIERGENFFTFARDMTIKSTKAMVQPTIPENLDPWRSKLLWASRVLPMPLVGLLIIGGICTDAGGQVSEYPELDALSRLDFGAAMKVFLAKRLTSEFTQVTADVEANSVIIGERNKAATEALRRAIDEGHNRIAILYGGGHMPDLGRRLREDFDLVPSQVQWITAWSIRKRDLKSSSFPFLKTMAEISGWPLNRYQTLALLIFSLVLAVDLWFWELFFGTTVNWVSQAASDASQYIGNGPAM*

Click here to download the sequence:
Link to NCBI Protein BLAST