Transcript Information: R_Transcript_175845.p1


Annotated TAIR IDAT1G57820.1
Annotated Gene NameZinc finger (C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)VIM1, ORTH2
Annotation TypeHomolog
Chromosome Positionchr1:21414342-21417902 | Reverse length=645
E-Value6E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35790119519056
Replicate 20.41169216502545
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.87689732710532
Replicate 30.35591393373308
Condition 3: 24 Hour
Replicate 10.22507654144808
Replicate 20.21622802833899
Replicate 30.42917068013524


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_175845.p1 GENE.R_Transcript_175845~~R_Transcript_175845.p1 ORF type:internal len:102 (+),score=14.98 R_Transcript_175845:1-303(+)
GTTTCGAGAAATGGGTGGGGCAGGGAAAGCAGACGTGCCAAATGCAGGAAACTTATTCCTGACAAAATGCGTATCCTCCCTAGAATCAACGCGTCTCTGGTTTTGGCAATCAGGATGGCTAGGGTGCCAAGCACTACTAAAGTTGCAGCTCCTAGAGTCATTCAATTTGTGCACAATGAGGATCTGCCTGAAAAGGCATTCACCACCAGCAATGCTAAAAGGGCAGGCAAAGCAAATGCTAAAAGTGGAAGAATCTTCGTCACTATCCCGAATGATTATCTTGGACCTATAACTGAAGAGTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_175845.p1 GENE.R_Transcript_175845~~R_Transcript_175845.p1 ORF type:internal len:102 (+),score=14.98 R_Transcript_175845:1-303(+)
VSRNGWGRESRRAKCRKLIPDKMRILPRINASLVLAIRMARVPSTTKVAAPRVIQFVHNEDLPEKAFTTSNAKRAGKANAKSGRIFVTIPNDYLGPITEEY

Click here to download the sequence:
Link to NCBI Protein BLAST