Transcript Information: R_Transcript_175858.p1


Annotated TAIR IDAT1G78915.3
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29667729-29671081 | Reverse length=405
E-Value1E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0421601591198
Replicate 20.45644131339778
Replicate 32.1578810778984
Condition 2: 8 Hour
Replicate 11.951771843621
Replicate 21.1342476296254
Replicate 32.2360679749752
Condition 3: 24 Hour
Replicate 12.1626919852185
Replicate 20.47946214979516
Replicate 32.6963114469366


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_175858.p1 GENE.R_Transcript_175858~~R_Transcript_175858.p1 ORF type:3prime_partial len:138 (+),score=32.02 R_Transcript_175858:258-668(+)
ATGTGGGTTACAGCAACCCAATTGAATTTTCAAGGTCTTATCACCATTAAAACCTTCCATCAAAAATCTTCATCCTTTCAAATCCGTTGTTGCGATTCTAACCCTTCAACTCCTCGTGGGTTTGGCCCTCAAGAAGATAACAATAATACTAATGTGAAGAAAAGAACCACCTCTAAGGACCAAAAGGGCATGCTTTTACAACAAAGAAATTCCACAAGTAGGCAGCCAGCCCCTGTGTCTGGTCAAGCACCTGGAGTGAGTTCAAGGCTTGACCAAAAGTATAACCAGAATTCTTCAGATCGCCAGTTTGAGGAAAGACTTCAAGCTGTGAAAAGGTTGGCGCTTGAGAAGAAAAAAGCAGAAGAAGAGAGCAACTTTGGAGCAATTGACTATGATGCACCAATTGAGCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_175858.p1 GENE.R_Transcript_175858~~R_Transcript_175858.p1 ORF type:3prime_partial len:138 (+),score=32.02 R_Transcript_175858:258-668(+)
MWVTATQLNFQGLITIKTFHQKSSSFQIRCCDSNPSTPRGFGPQEDNNNTNVKKRTTSKDQKGMLLQQRNSTSRQPAPVSGQAPGVSSRLDQKYNQNSSDRQFEERLQAVKRLALEKKKAEEESNFGAIDYDAPIEP

Click here to download the sequence:
Link to NCBI Protein BLAST