Transcript Information: R_Transcript_176119.p2


Annotated TAIR IDAT5G60960.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24528423-24529988 | Reverse length=521
E-Value1.3E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.174427992125
Replicate 22.5104272236878
Replicate 30.99594511287619
Condition 2: 8 Hour
Replicate 12.3953563535349
Replicate 22.4305306349115
Replicate 37.1028041558036
Condition 3: 24 Hour
Replicate 15.9889931898358
Replicate 23.3562350485661
Replicate 36.6614753394905


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_176119.p2 GENE.R_Transcript_176119~~R_Transcript_176119.p2 ORF type:internal len:92 (-),score=14.83,PPR_2|PF13041.2|0.0012,PPR_2|PF13041.2|7.4e-07,PPR_2|PF13041.2|0.00049,PPR|PF01535.16|8.4,PPR|PF01535.16|85,PPR|PF01535.16|8.7e+02,PPR|PF01535.16|4.6e-06,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|49,PPR_1|PF12854.3|2.1e+03,PPR_1|PF12854.3|4.2e-05,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|7.9,PPR_3|PF13812.2|0.01 R_Transcript_176119:3-275(-)
GATGGGAAGCTCGAGGAGGCGAGACGGTTGGCTAGGGAGATGTATAGGGGAGGGTTTGAGATCAGGACGATGGCGTATAATGCCATTCTTGATTGTGTGTGTAGGCTTTGTAGGAAGAAGGACCCTTTTCGGCTTCGGACCGAGGCCGAGAATGTGTTAGTAGATATGGATGCGGCAGGTGTGCCTTGGGATACCGAGACCTTCAATGTGTTGATTACGAATTTGTGTAAGCTTCGTATGACCGAGGAGGCTATGAAGTTGTTCTTTAGGATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_176119.p2 GENE.R_Transcript_176119~~R_Transcript_176119.p2 ORF type:internal len:92 (-),score=14.83,PPR_2|PF13041.2|0.0012,PPR_2|PF13041.2|7.4e-07,PPR_2|PF13041.2|0.00049,PPR|PF01535.16|8.4,PPR|PF01535.16|85,PPR|PF01535.16|8.7e+02,PPR|PF01535.16|4.6e-06,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|49,PPR_1|PF12854.3|2.1e+03,PPR_1|PF12854.3|4.2e-05,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|7.9,PPR_3|PF13812.2|0.01 R_Transcript_176119:3-275(-)
DGKLEEARRLAREMYRGGFEIRTMAYNAILDCVCRLCRKKDPFRLRTEAENVLVDMDAAGVPWDTETFNVLITNLCKLRMTEEAMKLFFRM

Click here to download the sequence:
Link to NCBI Protein BLAST