Transcript Information: R_Transcript_176132.p1


Annotated TAIR IDAT1G73040.1
Annotated Gene NameMannose-binding lectin superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27475159-27475777 | Reverse length=176
E-Value1.2E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11852572048519
Replicate 20.54535845237138
Replicate 30.44623514797699
Condition 2: 8 Hour
Replicate 11.4309921073065
Replicate 20.43560159430881
Replicate 30.94294081144867
Condition 3: 24 Hour
Replicate 10.59630668123907
Replicate 20.85929580093158
Replicate 30.42638385753696


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_176132.p1 GENE.R_Transcript_176132~~R_Transcript_176132.p1 ORF type:5prime_partial len:154 (+),score=23.68,Jacalin|PF01419.13|1.5e-28 R_Transcript_176132:3-464(+)
TTCATTTGTTTGCCCTCAAATGGAAGGAGGGAAGGATCAACAACGTTCAAAGATGAAGATAGCAGTAGGGCCATTGGGGGTGGTCAAGGTGGAACCAGCTGGGATGATGGATGTTACCATGGAATAAGAGAGATTAAACTCGGTTATGATCGATGTATCGATTCAATCTCGATGGTGTACGATAAAAATGGGAAGCCTGTCGAAGCAGAGAAACATGGAGGCCTAGGTGGAAACAAAGTGGCAGAGATTAAGCTGAATTATCCTGAAGAGTACTTGATCAGTGTTAATGGTTATCACTCACCAGTAGTACATGGTTGGAGTCTAGTTATTCGATCATTAACTTTCAAGAGCAACCGGAGAACTTTTGGACCCTTTGGCATTGAAGAAGGCACTCCGTTTACATTTCCCATGGAGGGTGGGAAAATTATCGGCTTCAAAAGGGAGAAGCGGTTGTTATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_176132.p1 GENE.R_Transcript_176132~~R_Transcript_176132.p1 ORF type:5prime_partial len:154 (+),score=23.68,Jacalin|PF01419.13|1.5e-28 R_Transcript_176132:3-464(+)
FICLPSNGRREGSTTFKDEDSSRAIGGGQGGTSWDDGCYHGIREIKLGYDRCIDSISMVYDKNGKPVEAEKHGGLGGNKVAEIKLNYPEEYLISVNGYHSPVVHGWSLVIRSLTFKSNRRTFGPFGIEEGTPFTFPMEGGKIIGFKREKRLLS*

Click here to download the sequence:
Link to NCBI Protein BLAST