Transcript Information: R_Transcript_176141.p1


Annotated TAIR IDAT3G58720.2
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21716920-21717908 | Reverse length=266
E-Value1.3E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1318540707258
Replicate 24.8389911115687
Replicate 35.1003282928933
Condition 2: 8 Hour
Replicate 18.0344244358148
Replicate 26.5510396019098
Replicate 36.9486634406169
Condition 3: 24 Hour
Replicate 18.6988566448723
Replicate 26.1168882079335
Replicate 36.1559169431899


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_176141.p1 GENE.R_Transcript_176141~~R_Transcript_176141.p1 ORF type:complete len:256 (+),score=34.56,zf-RING_2|PF13639.2|4.8e-14,zf-RING_11|PF17123.1|5.6e-11,zf-RING_11|PF17123.1|2.9e+03,zf-RING_5|PF14634.2|1.6e-09,zf-C3HC4|PF00097.21|8.4e-09,zf-C3HC4|PF00097.21|2.6e+02,zf-rbx1|PF12678.3|9.4e-08,zf-C3HC4_2|PF13923.2|8.6e-08,zf-RING_UBOX|PF13445.2|4.2e+03,zf-RING_UBOX|PF13445.2|2.6e-06,zf-RING_UBOX|PF13445.2|1.1e+02 R_Transcript_176141:812-1579(+)
ATGAACAGGAGAAGTGATTTCCCATCCAATGTTTCGAGGCCTGTAACTCAACCAAGTTATGGAGATGCTAATCAGCCCGTGTATCAAGATAATGCAAGAGTTGGTGCACCGGTCGAATTCAGGCCGTTTGAGGAAAGACTTCCTAGGAGACCCTTTGGCCTGAGTAGCATGCCCTTACACCCTTATCGCCCCACGAGAATCATAATCTACAACATGGGTCGAGGGATGGGCCCTAGGCTTGCCCCATTTGAGCACCAGCTAACACCCAGATTTCTCGACCAAGGGAACTCGCCTGCACCTACAGAGATTGATGAATCCAAGCTAAGCAGAGAAGAGCAAGAATTTGTCCTAAATAAACTCAAGAAAGAAATCTACAACCCTGTGCCTAAGATGTTGGCAAGAAGAGTGAGCCTTTACTATAGGGATCTCAATCGGGACCTCAATAACAAGGCTGTCGACAAGCATAGAGATGAAGAAGGCAAAAGCTGTGCTGTTTGTTTAGAAGATTTTCAGCCTAGAGAACAAGTAATGGTTACGCCTTGTAAGCACATATTCCATGAGGAATGCATTGTACCTTGGGTGAAGAATCACGGGCAGTGTCCTGTATGTAGGCACGCTTTGTGTGAGAGAATGAGGGAAAACAACCCATCTTTGATGAACAACAGCAATAATAGAGGTCCAACATTGCCAGTTGATCATCAACCGTTTGAAGGTGATCTTATTTCACTTATTCAAGCAGTGGATGAAGCCTTTCCATGGGGAGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_176141.p1 GENE.R_Transcript_176141~~R_Transcript_176141.p1 ORF type:complete len:256 (+),score=34.56,zf-RING_2|PF13639.2|4.8e-14,zf-RING_11|PF17123.1|5.6e-11,zf-RING_11|PF17123.1|2.9e+03,zf-RING_5|PF14634.2|1.6e-09,zf-C3HC4|PF00097.21|8.4e-09,zf-C3HC4|PF00097.21|2.6e+02,zf-rbx1|PF12678.3|9.4e-08,zf-C3HC4_2|PF13923.2|8.6e-08,zf-RING_UBOX|PF13445.2|4.2e+03,zf-RING_UBOX|PF13445.2|2.6e-06,zf-RING_UBOX|PF13445.2|1.1e+02 R_Transcript_176141:812-1579(+)
MNRRSDFPSNVSRPVTQPSYGDANQPVYQDNARVGAPVEFRPFEERLPRRPFGLSSMPLHPYRPTRIIIYNMGRGMGPRLAPFEHQLTPRFLDQGNSPAPTEIDESKLSREEQEFVLNKLKKEIYNPVPKMLARRVSLYYRDLNRDLNNKAVDKHRDEEGKSCAVCLEDFQPREQVMVTPCKHIFHEECIVPWVKNHGQCPVCRHALCERMRENNPSLMNNSNNRGPTLPVDHQPFEGDLISLIQAVDEAFPWGA*

Click here to download the sequence:
Link to NCBI Protein BLAST