Transcript Information: R_Transcript_176217.p1


Annotated TAIR IDAT1G13990.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3110 (InterPro:IPR021503); Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4794810-4796476 | Forward length=308
E-Value4.8E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7254042693515
Replicate 21.4624288847173
Replicate 30.79774708046302
Condition 2: 8 Hour
Replicate 10.85274156532695
Replicate 20.55624084182054
Replicate 30.45153260249719
Condition 3: 24 Hour
Replicate 10
Replicate 21.5361871864084
Replicate 30.98004647851779


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_176217.p1 GENE.R_Transcript_176217~~R_Transcript_176217.p1 ORF type:complete len:201 (+),score=34.79 R_Transcript_176217:988-1590(+)
ATGCAAACATATGGTGATTGCTATTTGTGTGACAGGTGGTTAGTATTTACAGTAGTTTTGCATATGTGCATGTGCGCTTGTGTTCTGTGGCTAGTGATTTCACTCTATTGTACAAAAGTTCTGATTGTTTCTGTTTCCACTGGTGCAGTTTTGGATTCTAATCCATGGAGGGAAACTTCTAAACCTGTATATGTTCTAACACACAAGGAAAACCAACTCTGCACCATGAAAACTCGGAGGAATCGCAGCGAAGTCGAAAGAGAGCTTGGGTTGCTCTTTTCAAAAGGTCGAAAATGGGGCTCTGATTTTAGTAATCAAGCCAAGCAATCTAAGAATGGCAAAAGGTTTGAGATGCTTGTCGAGGATGTCAGGGAAGGTGTACTTGTATTTGAAGACCAAAACGATGCTGTCAAATATTGTGACCTATTGCAGGGAGGGGGTCAAGGATGTGAAGGTGTTGCAGAGATAGAAGCATCATCTGTTTTCGATCTTTGTCGAAAATCACAAGCTTTGGCGGTTTTGTTTCGCCGAGGGAGGACACCACCTCAACCTGAAAGCCTTGAGCTTAACTTGAAAGCACGCAAGCGATCCCTTGAAGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_176217.p1 GENE.R_Transcript_176217~~R_Transcript_176217.p1 ORF type:complete len:201 (+),score=34.79 R_Transcript_176217:988-1590(+)
MQTYGDCYLCDRWLVFTVVLHMCMCACVLWLVISLYCTKVLIVSVSTGAVLDSNPWRETSKPVYVLTHKENQLCTMKTRRNRSEVERELGLLFSKGRKWGSDFSNQAKQSKNGKRFEMLVEDVREGVLVFEDQNDAVKYCDLLQGGGQGCEGVAEIEASSVFDLCRKSQALAVLFRRGRTPPQPESLELNLKARKRSLED*

Click here to download the sequence:
Link to NCBI Protein BLAST