Transcript Information: R_Transcript_176220.p1


Annotated TAIR IDAT1G13990.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3110 (InterPro:IPR021503); Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4794810-4796476 | Forward length=308
E-Value5.3E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0718143668219
Replicate 24.9260550976699
Replicate 34.6694503561388
Condition 2: 8 Hour
Replicate 15.1797022003788
Replicate 25.848230635387
Replicate 37.6097136831622
Condition 3: 24 Hour
Replicate 15.1213569969494
Replicate 22.9689771583469
Replicate 35.2193757330294


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_176220.p1 GENE.R_Transcript_176220~~R_Transcript_176220.p1 ORF type:complete len:260 (+),score=46.55 R_Transcript_176220:352-1131(+)
ATGGATTCTCTCTCCTCAGTCTCGCCCTCCATAGTCCTCCCTCACACCACTTCTCTTCTCCGCCGCCACCGTAAATCTTCCTCTCTCCTCTTCCCGACCCCTCGTAATCTCTCCACTTCTCCCTCTCCTTCTAGAAGTTTCTCGAAAATTCGTTGTAAATCCGGTGGAGAAGGGAGTGCTGATGATGATGTGGAAGTGGATCGAGCCCTTCAGTTGGACGGCACAATTCCCAGTACTTCCGATGAGTTCGTTAAGCAAGTCTCGTCACGTGCCTACGACATGCGCCGTAATCTCCAGCAGTCTCTCGATTCCACTTCCTACGATGTTTTGGATTCTAATCCATGGAGGGAAACTTCTAAACCTGTATATGTTCTAACACACAAGGAAAACCAACTCTGCACCATGAAAACTCGGAGGAATCGCAGCGAAGTCGAAAGAGAGCTTGGGTTGCTCTTTTCAAAAGGTCGAAAATGGGGCTCTGATTTTAGTAATCAAGCCAAGCAATCTAAGAATGGCAAAAGGTTTGAGATGCTTGTCGAGGATGTCAGGGAAGGTGTACTTGTATTTGAAGACCAAAACGATGCTGTCAAATATTGTGACCTATTGCAGGGAGGGGGTCAAGGATGTGAAGGTGTTGCAGAGATAGAAGCATCATCTGTTTTCGATCTTTGTCGAAAATCACAAGCTTTGGCGGTTTTGTTTCGCCGAGGGAGGACACCACCTCAACCTGAAAGCCTTGAGCTTAACTTGAAAGCACGCAAGCGATCCCTTGAAGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_176220.p1 GENE.R_Transcript_176220~~R_Transcript_176220.p1 ORF type:complete len:260 (+),score=46.55 R_Transcript_176220:352-1131(+)
MDSLSSVSPSIVLPHTTSLLRRHRKSSSLLFPTPRNLSTSPSPSRSFSKIRCKSGGEGSADDDVEVDRALQLDGTIPSTSDEFVKQVSSRAYDMRRNLQQSLDSTSYDVLDSNPWRETSKPVYVLTHKENQLCTMKTRRNRSEVERELGLLFSKGRKWGSDFSNQAKQSKNGKRFEMLVEDVREGVLVFEDQNDAVKYCDLLQGGGQGCEGVAEIEASSVFDLCRKSQALAVLFRRGRTPPQPESLELNLKARKRSLED*

Click here to download the sequence:
Link to NCBI Protein BLAST