Transcript Information: R_Transcript_176224.p1


Annotated TAIR IDAT1G13990.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3110 (InterPro:IPR021503); Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4794810-4796476 | Forward length=308
E-Value2E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6828971093003
Replicate 20.44672979609145
Replicate 31.1372139232132
Condition 2: 8 Hour
Replicate 11.9102447831184
Replicate 22.0616415881944
Replicate 30.77240896256966
Condition 3: 24 Hour
Replicate 10.81410663928029
Replicate 21.8770433098364
Replicate 31.8627833776083


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_176224.p1 GENE.R_Transcript_176224~~R_Transcript_176224.p1 ORF type:complete len:141 (-),score=17.56 R_Transcript_176224:69-491(-)
ATGGATTCTCTCTCCTCAGTCTCGCCCTCCATAGTCCTCCCTCACACCACTTCTCTTCTCCGCCGCCACCGTAAATCTTCCTCTCTCCTCTTCCCGACCCCTCGTAATCTCTCCACTCTTCCCTCTCCTTCTAGAAGTTTCTCGAAAATTCGTTGTAAATCCAGTGGAGAAGGGAATGCTGATGATGACGTGGAGGTGGATCGAGCCCTTCAGTTGGACGGCACAATTCCCAGTACTTCCGATGAGTTCGTTAAGCAAGTCTCGTCACGTGCCTACGACATGCGCCGTAATCTCCAGCAGTCTCTCGATTCCACTTCCTACGATGGTGAGATTTCAAATCCTAGTTTTATTTATTTGGAAATTCAGGGTTTGAAGAAGTGCGATTCAGGTGATTATGTTTTTGTCTGGTGTTGTGTTATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_176224.p1 GENE.R_Transcript_176224~~R_Transcript_176224.p1 ORF type:complete len:141 (-),score=17.56 R_Transcript_176224:69-491(-)
MDSLSSVSPSIVLPHTTSLLRRHRKSSSLLFPTPRNLSTLPSPSRSFSKIRCKSSGEGNADDDVEVDRALQLDGTIPSTSDEFVKQVSSRAYDMRRNLQQSLDSTSYDGEISNPSFIYLEIQGLKKCDSGDYVFVWCCVM*

Click here to download the sequence:
Link to NCBI Protein BLAST