Transcript Information: R_Transcript_176360.p1


Annotated TAIR IDAT1G09920.1
Annotated Gene NameTRAF-type zinc finger-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3224863-3226860 | Reverse length=192
E-Value8E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2780793680208
Replicate 27.5746147071455
Replicate 38.8437404643373
Condition 2: 8 Hour
Replicate 18.3685867541218
Replicate 212.878735743974
Replicate 38.156736418022
Condition 3: 24 Hour
Replicate 114.239652584272
Replicate 24.6064781227155
Replicate 39.9741439079532


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_176360.p1 GENE.R_Transcript_176360~~R_Transcript_176360.p1 ORF type:complete len:158 (+),score=19.19 R_Transcript_176360:401-874(+)
ATGAAGTGTGGTGAGTGCTGGAGAAGGTGTTCAGCCCAACACCAGGCCCGCACCAAGGTAGCTTGTTCACTTTGCAGTGAAGCAATGGACCGTGAAATTTTGGATGTGCACAAGGGTGAAAACTGTCCTCAGAGGATTGTAACATGTGAATACTGCGAGTTTCCTTTGCCTGCCATTGACCTGTTTGAACATCAGGATGTATGTGGGAATCGAACAGAATATTGCCATCGCTGCGGTAGGTATATCAGGTTGCGTGATCAATATGCCCATGAAACAGCATGTAATGGTGACAGTACTGCAGGCTCTTCCAGGGATGTAAGGGCTGCTGCTGAAAGTGAACCTAGACCTCGAAGAAATGCCCCGCTGACATATCCACGAAGACACCTGTTATTTACAATTGCGATTACAGGGATTGCTTTTATTCTAGGATCCTTTTTCTATCAGAAGAAATCAGAGAGCAGTCCAGTGAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_176360.p1 GENE.R_Transcript_176360~~R_Transcript_176360.p1 ORF type:complete len:158 (+),score=19.19 R_Transcript_176360:401-874(+)
MKCGECWRRCSAQHQARTKVACSLCSEAMDREILDVHKGENCPQRIVTCEYCEFPLPAIDLFEHQDVCGNRTEYCHRCGRYIRLRDQYAHETACNGDSTAGSSRDVRAAAESEPRPRRNAPLTYPRRHLLFTIAITGIAFILGSFFYQKKSESSPVN*

Click here to download the sequence:
Link to NCBI Protein BLAST