Transcript Information: R_Transcript_176420.p1


Annotated TAIR IDAT5G38510.1
Annotated Gene NameRhomboid-related intramembrane serine protease family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15417839-15420002 | Reverse length=434
E-Value1E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5545104109788
Replicate 20.17304643200246
Replicate 30.75516717349953
Condition 2: 8 Hour
Replicate 10.20180657923554
Replicate 20.18429298220757
Replicate 30.04986706214392
Condition 3: 24 Hour
Replicate 10.31535449488605
Replicate 20.30295685289254
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_176420.p1 GENE.R_Transcript_176420~~R_Transcript_176420.p1 ORF type:complete len:364 (+),score=32.04 R_Transcript_176420:192-1283(+)
ATGTCTTGTATTCCACCATTACGCAGAAGCTTTAGTTCCGAATCTCATGTCATTCATGAGGGTCTCAGTTGCATTTCTACTGCACCCAGCAACTCCAGCAGTAAGCCTGTTGGTATTTTAGCAGCTAGCGAGAGAGTGAACTTGAACAGAAGAATTCAGTTATTACGAGAAGGTAACAACTGTGGAAGAAGGACAAAGACTTTGCTTATAAGGAATGAAGCTCCTGATATGTCAAGTGCAACATGCAAGTCGAAGATAAACCCCTCAACAGAGGTTTTATCTCCTATCTATTATGCCTCGGAGTCTAATTCTGTAGACCAGAATCAGAGATCCTTGGACGCAAACCTTGAAAAACTTGAGATTCATACCGACCAGATCGATGATCAAGCAAGAAAGGAATTGGAGTCTTTGGAAAGATATCTTGACACACTTAAAAAAGATGGAGAGACAAGACTACCTGTTTCTGGCAGGAGTATGTCAAACGCGTCCAAAGACTTGGCTAATGGCGATATTGAAATTGAAAGCAGCCAAACAAGGGAACTGAAAGGGTATTCAGGGCCAAGACACAAGAAAAGCAATATTTATGTTACCAAGTCTGTGTCATCTCCGGTGTATGATGAAAAAGAGAGTCGCAATTTATACCTCATAAGTATCTTACTGGCAATAAATATCGCGGTGTTCCTATTTGAGATAGCGAGCCCTGTAAGGAGTTCTGACTATAATCTCTATTCGTTGCCGCTGATGTATGGTGCCAAGGTTAATGATCTGATCATGGTTGGAGAATGGTGGAGGCTTGTGACACCAATGTTTCTGGTACAAGGGACAGTTTGGTCCGTGATTTCTTTCTGTTTATGTTTCAGAACAATGTTCCATTACTTGGTGAAACTTCAAACTAGGCTCAGTTTGGTTTCAGCTTTTAGTTCAGTTCAGTCCAGTCAATTTCGTTCCAGTTCTGTTCCATTAATTATGGTTACTGAGTTTCAGTTCATCCGATCGAGCTCAAGTTCAGCACCCGTCTTAGTTCTAAAAACAGGGTTAGGATCTGAGACTTGTATAGGTTCTTTTTTTTTTTTTTTGAATGGGGAGACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_176420.p1 GENE.R_Transcript_176420~~R_Transcript_176420.p1 ORF type:complete len:364 (+),score=32.04 R_Transcript_176420:192-1283(+)
MSCIPPLRRSFSSESHVIHEGLSCISTAPSNSSSKPVGILAASERVNLNRRIQLLREGNNCGRRTKTLLIRNEAPDMSSATCKSKINPSTEVLSPIYYASESNSVDQNQRSLDANLEKLEIHTDQIDDQARKELESLERYLDTLKKDGETRLPVSGRSMSNASKDLANGDIEIESSQTRELKGYSGPRHKKSNIYVTKSVSSPVYDEKESRNLYLISILLAINIAVFLFEIASPVRSSDYNLYSLPLMYGAKVNDLIMVGEWWRLVTPMFLVQGTVWSVISFCLCFRTMFHYLVKLQTRLSLVSAFSSVQSSQFRSSSVPLIMVTEFQFIRSSSSSAPVLVLKTGLGSETCIGSFFFFLNGET*

Click here to download the sequence:
Link to NCBI Protein BLAST