Transcript Information: R_Transcript_176420.p2


Annotated TAIR IDAT5G38510.1
Annotated Gene NameRhomboid-related intramembrane serine protease family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15417839-15420002 | Reverse length=434
E-Value9E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8139588526429
Replicate 20.39123541148382
Replicate 31.1382229861442
Condition 2: 8 Hour
Replicate 10.91251670610852
Replicate 20.13888746485208
Replicate 30.45097169243197
Condition 3: 24 Hour
Replicate 10.71297537974236
Replicate 20.6849459282788
Replicate 30.81569085789679


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_176420.p2 GENE.R_Transcript_176420~~R_Transcript_176420.p2 ORF type:complete len:161 (+),score=26.86 R_Transcript_176420:1624-2106(+)
ATGGACCATGAATGTGTCATGCATGAACACAATCAGATATTACATCAAGTTTTACACTTGTATCGTCAGGGACCGATGTTTGCTATCATTGGAGCTTGGCTAATCTATCAAGTTCAAAACAAAGATGTGCATGAGAAGGCACCTTCAGAGGTTATGTTTGACAAGGCTATCATTGCTACAGCTCTTAGCTTTGTGCTAGCAAACTTTGGGCCTATTGACGACTGGACAAATCTGGGAGCAGCCATATCAGGAATCATATACGGGTATTTCACATGCCCCGTACTGCAAGTAGATGATGCATCTACTGATGGTGGAAAGGGGAGAGTCAAGGATCAAATCACACTCATTAGACAGCCTGCTAATACTTGTAAATCCATTGTCATATTCACTCTCTTTATTTCTGCTCTAAGTTCCTTGCTTTTCTTTGTGGAGTCTCCGCTGGACAACCTGGAACTTGAGGAGCTCATCCAGAGTATTGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_176420.p2 GENE.R_Transcript_176420~~R_Transcript_176420.p2 ORF type:complete len:161 (+),score=26.86 R_Transcript_176420:1624-2106(+)
MDHECVMHEHNQILHQVLHLYRQGPMFAIIGAWLIYQVQNKDVHEKAPSEVMFDKAIIATALSFVLANFGPIDDWTNLGAAISGIIYGYFTCPVLQVDDASTDGGKGRVKDQITLIRQPANTCKSIVIFTLFISALSSLLFFVESPLDNLELEELIQSIE*

Click here to download the sequence:
Link to NCBI Protein BLAST