Transcript Information: R_Transcript_176421.p1


Annotated TAIR IDAT5G38510.1
Annotated Gene NameRhomboid-related intramembrane serine protease family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15417839-15420002 | Reverse length=434
E-Value9E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0065971114735
Replicate 20
Replicate 30.16843189408936
Condition 2: 8 Hour
Replicate 10
Replicate 20.082209124416124
Replicate 30.1334677251499
Condition 3: 24 Hour
Replicate 10.08440370304303
Replicate 20
Replicate 30.080469502525358


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_176421.p1 GENE.R_Transcript_176421~~R_Transcript_176421.p1 ORF type:3prime_partial len:272 (+),score=36.09 R_Transcript_176421:71-883(+)
ATGTCTTGTATTCCACCTTTACGGAGAAGCTTTAGTTCCGACTCTCATGTCATTCGTAAGGGTGTCAGGTGCATTTCTACTGCACCCAGCAACTCCAGCAGTAAGCCTGTTGGTATTTTAGCAGCTAGCGAGAGAGTGAACTTGAACAGAAGAATTCAGTTATTACGAGAAGGTAACAACTGTGGAAGAAGGACAAAGACTTTGCTTATAAGGAATGAAGCTCCTGATATGTCAAGTGCAACATGCAAGTCGAAGATAAACCCCTCAACAGAGGTTTTATCTCCTATCTATTATGCCTCGGAGTCTAATTCTGTTGACGAACATCAGAGATCCTTGGACGCATACCTTGAAAAACTTGAGAGTCATACCGAGCAGATCGATGATCAAGCAAGAAAGGAATTGGAGTCTTTGGAAAGATATCTTGACACACTTAAAGAAGATGCAGAGTCAAGATTATCTATTTCTGGCAGGAGTATGCCAAACGCGTTCAAAGACTTGGCTATTGGCAATATTGAAATTGAAAGCAGCCAAACAAGGGAACTGAAAGGGTATTCAGGGCCAAGACACAAGAAAAGCAATATTTATGTTACCAAGTCTGTGTCATCTCCGGTGTATGATGAAAAAGAGAGTCGCAATTTATACCTCATAAGTATCTTACTGGCAATAAATATCGCGGTGTTCCTATTTGAGATAGCGAGCCCTGTAAGGAGTTCTGACTATAATCTCTATTCGTTGCCGCTGATGTATGGTGCCAAGGTTAATGATCTGATCATGGTTGGAGAATGGTGGAGGCTTGTGACACCAATGTTTCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_176421.p1 GENE.R_Transcript_176421~~R_Transcript_176421.p1 ORF type:3prime_partial len:272 (+),score=36.09 R_Transcript_176421:71-883(+)
MSCIPPLRRSFSSDSHVIRKGVRCISTAPSNSSSKPVGILAASERVNLNRRIQLLREGNNCGRRTKTLLIRNEAPDMSSATCKSKINPSTEVLSPIYYASESNSVDEHQRSLDAYLEKLESHTEQIDDQARKELESLERYLDTLKEDAESRLSISGRSMPNAFKDLAIGNIEIESSQTRELKGYSGPRHKKSNIYVTKSVSSPVYDEKESRNLYLISILLAINIAVFLFEIASPVRSSDYNLYSLPLMYGAKVNDLIMVGEWWRLVTPMFL

Click here to download the sequence:
Link to NCBI Protein BLAST