Transcript Information: R_Transcript_176452.p1


Annotated TAIR IDAT5G15170.1
Annotated Gene Nametyrosyl-DNA phosphodiesterase-related
Annotated Gene Symbol(s)TDP1
Annotation TypeOrtholog
Chromosome Positionchr5:4926300-4929307 | Reverse length=605
E-Value8.5E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0304090861535
Replicate 20.33865000671448
Replicate 30
Condition 2: 8 Hour
Replicate 10.39493330560073
Replicate 20.18032969226763
Replicate 30.43915186984807
Condition 3: 24 Hour
Replicate 10.74057442670013
Replicate 20
Replicate 30.17651374747498


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_176452.p1 GENE.R_Transcript_176452~~R_Transcript_176452.p1 ORF type:5prime_partial len:124 (+),score=11.31 R_Transcript_176452:2-373(+)
AATGCCATCCCTAGTCCAGTAAAAAATGTCAAGAAGGAATTTTTGAAGAAGTACTGGGCAAAGTGGAAGGCCACCCACACTGGCCGATGTGGTCAATGGTCAGGAGACGTATGCTTTGGCGCAAAGCGATTTTGGCTACTCTTTGGAGCATCTGGCTGGAAAGGAATGGAAGAGTTTTCTCCAAGTCCCCTCCCCTGTCCATTGACCTTTGGGCCTAAGATCACCTTCTGTGCTTCTCTGTGGTTCAAGGCTCATGGGGCCTTTAAGGACTACACTACCTTAAAAGTCCAATATAATTGGGTAACTTGTAGTCTAATAACTTTACAGAGGACTACTTGTTCTCTTTGCTGTACTCATCTGCTTTTACAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_176452.p1 GENE.R_Transcript_176452~~R_Transcript_176452.p1 ORF type:5prime_partial len:124 (+),score=11.31 R_Transcript_176452:2-373(+)
NAIPSPVKNVKKEFLKKYWAKWKATHTGRCGQWSGDVCFGAKRFWLLFGASGWKGMEEFSPSPLPCPLTFGPKITFCASLWFKAHGAFKDYTTLKVQYNWVTCSLITLQRTTCSLCCTHLLLQ*

Click here to download the sequence:
Link to NCBI Protein BLAST