Transcript Information: R_Transcript_176588.p1


Annotated TAIR IDAT5G14640.1
Annotated Gene Nameshaggy-like kinase 13
Annotated Gene Symbol(s)ATSK13, SK13
Annotation TypeOrtholog
Chromosome Positionchr5:4719350-4721772 | Reverse length=410
E-Value7.4E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17721321315261
Replicate 20
Replicate 30.22239551064226
Condition 2: 8 Hour
Replicate 10
Replicate 20.21709594020569
Replicate 30.35245845864829
Condition 3: 24 Hour
Replicate 10.22289133230781
Replicate 20
Replicate 30.42500397450286


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_176588.p1 GENE.R_Transcript_176588~~R_Transcript_176588.p1 ORF type:5prime_partial len:103 (+),score=14.24,Pkinase|PF00069.21|4.2e-08 R_Transcript_176588:2-310(+)
CCAAACATGTCGTATATATGCTCTAGGTATTACTGTGCTCCAAAACATATATTTAGAGCAACAGAGTACACCACAACAATTGATAGTTGGTTTGCAAAATGTTTTCTTGTTGAGCTATTGCTTGGACAACCTTTGTTCCGCCGTGAGAGTGGATTTGACCAGCTCGTGGAGATTATTAAGGCTATGATGCGGCCTTATGGGACACCTTATGCTGCAATCTATGCACATGCTGCAATCAATGCACATGCTGCAATTCCTCTGGTAAGCTTGGTTTCTAATTTCATTACTGGTTTCACAGCTACTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_176588.p1 GENE.R_Transcript_176588~~R_Transcript_176588.p1 ORF type:5prime_partial len:103 (+),score=14.24,Pkinase|PF00069.21|4.2e-08 R_Transcript_176588:2-310(+)
PNMSYICSRYYCAPKHIFRATEYTTTIDSWFAKCFLVELLLGQPLFRRESGFDQLVEIIKAMMRPYGTPYAAIYAHAAINAHAAIPLVSLVSNFITGFTATL*

Click here to download the sequence:
Link to NCBI Protein BLAST