Transcript Information: R_Transcript_176589.p1


Annotated TAIR IDAT5G14640.1
Annotated Gene Nameshaggy-like kinase 13
Annotated Gene Symbol(s)ATSK13, SK13
Annotation TypeOrtholog
Chromosome Positionchr5:4719350-4721772 | Reverse length=410
E-Value1.7E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78676555839305
Replicate 20.36200517959135
Replicate 30.7898875033156
Condition 2: 8 Hour
Replicate 11.0554252132433
Replicate 21.3493635593819
Replicate 31.408314617099
Condition 3: 24 Hour
Replicate 10.98956065636656
Replicate 21.1407892529609
Replicate 31.1321226562188


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_176589.p1 GENE.R_Transcript_176589~~R_Transcript_176589.p1 ORF type:internal len:116 (+),score=16.24,Pkinase|PF00069.21|6.2e-08 R_Transcript_176589:2-346(+)
CCAAACATGTCGTATATATGCTCTAGGTATTACTGTGCTCCAAAACATATATTTAGAGCAACAGAGTACACCACAACAATTGATAGTTGGTTTGCAAAATGTTTTCTTGTTGAGCTATTGCTTGGACAACCTTTGTTCCGCCGTGAGAGTGGATTTGACCAGCTCGTGGAGATTATTAAGGCTATGATGCGGCCTTATGGGACACCTTATGCTGCAATCTATGCACATGCTGCAATCAATGCACATGCTGCAATTCCTCTGGATCTTTTAGAAGACTTCGACGGCAACATTAGTTATCTTTACCACCTGAGACATAAAGCTGAACACCTTGTTGCAGGATCTGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_176589.p1 GENE.R_Transcript_176589~~R_Transcript_176589.p1 ORF type:internal len:116 (+),score=16.24,Pkinase|PF00069.21|6.2e-08 R_Transcript_176589:2-346(+)
PNMSYICSRYYCAPKHIFRATEYTTTIDSWFAKCFLVELLLGQPLFRRESGFDQLVEIIKAMMRPYGTPYAAIYAHAAINAHAAIPLDLLEDFDGNISYLYHLRHKAEHLVAGSA

Click here to download the sequence:
Link to NCBI Protein BLAST