Transcript Information: R_Transcript_176591.p2


Annotated TAIR IDAT5G14640.1
Annotated Gene Nameshaggy-like kinase 13
Annotated Gene Symbol(s)ATSK13, SK13
Annotation TypeOrtholog
Chromosome Positionchr5:4719350-4721772 | Reverse length=410
E-Value8.4E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2734623921897
Replicate 23.4180023933509
Replicate 30.5327148278175
Condition 2: 8 Hour
Replicate 13.1319129583686
Replicate 22.0800820317382
Replicate 30.84426095908777
Condition 3: 24 Hour
Replicate 11.6017074810026
Replicate 22.0516519898211
Replicate 34.072131104539


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_176591.p2 GENE.R_Transcript_176591~~R_Transcript_176591.p2 ORF type:5prime_partial len:86 (+),score=4.46,Pkinase|PF00069.21|2.8e-08 R_Transcript_176591:2-259(+)
CCAAACATGTCGTATATATGCTCTAGGTATTACTGTGCTCCAAAACATATATTTAGAGCAACAGAGTACACCACAACAATTGATAGTTGGTTTGCAAAATGTTTTCTTGTTGAGCTATTGCTTGGACAACCTTTGTTCCGCCGTGAGAGTGGATTTGACCAGCTCGTGGAGATTATTAAGCTTCGATCGCTATTCTGGGAGAGAGAGAGAGAGAGGGAGATACCCTCGGTTCCTTTTTTTTATTATAAACCCACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_176591.p2 GENE.R_Transcript_176591~~R_Transcript_176591.p2 ORF type:5prime_partial len:86 (+),score=4.46,Pkinase|PF00069.21|2.8e-08 R_Transcript_176591:2-259(+)
PNMSYICSRYYCAPKHIFRATEYTTTIDSWFAKCFLVELLLGQPLFRRESGFDQLVEIIKLRSLFWEREREREIPSVPFFYYKPT*

Click here to download the sequence:
Link to NCBI Protein BLAST