Transcript Information: R_Transcript_176596.p1


Annotated TAIR IDAT5G14640.1
Annotated Gene Nameshaggy-like kinase 13
Annotated Gene Symbol(s)ATSK13, SK13
Annotation TypeOrtholog
Chromosome Positionchr5:4719350-4721772 | Reverse length=410
E-Value5.8E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0432418979163
Replicate 21.5668880907685
Replicate 31.88040383252
Condition 2: 8 Hour
Replicate 12.3754943605536
Replicate 21.8355947780078
Replicate 34.0637934224747
Condition 3: 24 Hour
Replicate 13.2552114725849
Replicate 21.9750978110965
Replicate 32.9401394355534


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_176596.p1 GENE.R_Transcript_176596~~R_Transcript_176596.p1 ORF type:5prime_partial len:134 (+),score=20.57,Pkinase|PF00069.21|8.3e-08 R_Transcript_176596:2-403(+)
CCAAACATGTCGTATATATGCTCTAGGTATTACTGTGCTCCAAAACATATATTTAGAGCAACAGAGTACACCACAACAATTGATAGTTGGTTTGCAAAATGTTTTCTTGTTGAGCTATTGCTTGGACAACCTTTGTTCCGCCGTGAGAGTGGATTTGACCAGCTCGTGGAGATTATTAAGGCTATGATGCGGCCTTATGGGACACCTTATGCTGCAATCTATGCACATGCTGCAATCAATGCACATGCTGCAATTCCTCTGGATCTGCTCGTTGATTTTCAACACTGTAGATGCTGGGCTCACAACCAAAAGTCCAAGGAGTCTCCTCTCCTGCTGCAAGTGAAGCTGTGGCTTTTTCCCCTGCTGAAGAGGAGGAAATTGACCCTCTGGATGCCTTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_176596.p1 GENE.R_Transcript_176596~~R_Transcript_176596.p1 ORF type:5prime_partial len:134 (+),score=20.57,Pkinase|PF00069.21|8.3e-08 R_Transcript_176596:2-403(+)
PNMSYICSRYYCAPKHIFRATEYTTTIDSWFAKCFLVELLLGQPLFRRESGFDQLVEIIKAMMRPYGTPYAAIYAHAAINAHAAIPLDLLVDFQHCRCWAHNQKSKESPLLLQVKLWLFPLLKRRKLTLWMPL*

Click here to download the sequence:
Link to NCBI Protein BLAST