Transcript Information: R_Transcript_176612.p1


Annotated TAIR IDAT5G53220.1
Annotated Gene Nameunknown protein; Has 3099 Blast hits to 2528 proteins in 332 species: Archae - 2; Bacteria - 245; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes - 1012 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21596824-21598004 | Forward length=368
E-Value2.4E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2350564434349
Replicate 21.8458286080262
Replicate 32.5891445948555
Condition 2: 8 Hour
Replicate 11.8066493760134
Replicate 22.3519294872205
Replicate 32.8780418723062
Condition 3: 24 Hour
Replicate 12.054309280972
Replicate 21.558063814876
Replicate 31.8211120069161


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_176612.p1 GENE.R_Transcript_176612~~R_Transcript_176612.p1 ORF type:complete len:637 (+),score=172.59 R_Transcript_176612:139-2049(+)
ATGGATTTGAATGAGATTCCTAGGAGTGATCACATGGTAATTAAAAGAGGAATTATGAGGGAAAAGCTGCCAAAATGTGATGATGATGATCAAGTAAGGAAATGTAGGGAGATAGAAGAAAAGGGTTTGGCACTAGAATTGGAAATTGGGAAGAAAAATATGGACTTAGAAGAGGTTAAGGGTAGAATTAGGGCTTTGGAAGGTGAAAAGGTGGCTATAGAAGATGAGATTAAGGGTTTAATGAAGAAAAAGGCTGACCTTGAACTTGAAACACCTAGCGTGAATGAGGTGATAGGTGGAGGGGATTCGTCGTTCGATGTATGGGGGGCTGAAGAGTCTAAGATTGATCAGCTGATGATCGAAAATAAGGTTTTGGAATGTGAAAAGAGTAGCGCGCTTAAGGAAGTTGAGGTTTGGAAGCAGAAATGTAAGGAGTTGGAGGCAAAAGTGCTTGCATTGGAGAAAAGATTGAGTTGTCGGGATGTTGATTCCACGTCGATTACAGCAGGTCAAGCTGTGAACAACGGTGATGATGGTAATAATCCGAGGGATTTAGTTTCTTCTTCTTGTATTCGTGGTGCTGGAGGTGGAGAAGCACAATTACCAGGAACACCCTGCATTGGGACACCACAAAAAAGATATGTGCTTATTGAGGATTTTCAAGGAGTACAGCCCAGGACCCATGTTAAGAGACAGCTTAAATTTCAAAATGAGAGAATCGAAAGGAAGATTGCTCCATCGACACTTTCAGGAGCAAGATCAACTTCTGGTCCTTTAGTTGATATTAGTGACAGTGATGATGAGCTTCTTATCGCTAGAAAGCATGGTTCCAGTTCACAGAGTAAAGGAACCCCTTTTGTGACTCGGAGTGGAGGTCTTGATGAAATAGATGGCATTTCAGATCAGGAAGAAACAAGTGATTGCAAGGGGAATCTTCTTTCCCGAGGAAAAAGAAAGCGAGGTCCTAAAATAGTTACTAGTGATGATGAGGATGAAGTTGAAGAAGCCCATCCCAGAAAACAAACTTTGAGAGTGGGTAACAGTGACAATGAAGGTGAAGAAGATGATACTAAACCAATAAAACAAGATTTCAGTGATTTTAATATCGACAATGAGAGTGATGATGATAATATTCCAATCAGTCAACTGAAAAGAAATCATTCTCAAAATTCAAGTCGTACTGTTGGTTTGCGCACAAGAAGCCTTTCTGGTCTTCAGGCTAATAGCGTTACTGATACTTCCAGTCGTCCTAGGAGACGTCTTGTTAAGTCTAGGCAATGTAGAAGGAGCGGAAGAGCACAGGAACGTGAAACTGGTTCTGAAAAGTTGGTAACTGACTATGTCGAAGATGATAAGTCAGAAGAAGAAGGCTCAGACAATGATACTGATAGCCTGGGCAGTTTTATTGTTCATGATTCTGATGTTGGAGATGTGGAAGATGATGTGTCAGAAAAAGAAGAGACTGATGACTCTAACGAGCTTGAAGATGAATCAGATGATAATCTTGATTTTGAAGAGATAATATCAAGATTACAGAGCAGGAAAATCCCCAACTCAAAATGGGATTTAGAAGGTGATATGCTCTCTGATTTTGGTAAGAATCCTGAGTTATGCATGAGGGCAGTTTGTGCCCTATATCGCCAGCAAACCATTGATGAAAAGGTGTGCAAGGAAAGCCTTCTCCGGAATGGGCGGGGCTTCAGTAAATTTGATGCACAGAGGGGAACAGGCCTGGGGGAATTTCTTACTGGTGGAGACCTGAATGGCGATTTAGTGAAATCTGTGAAGGAATTGCAAGAGCATGATCCCTGTGGTCTGGAAACGTGCAGCAGAATGGCAAGGCACTATTCGAAGCAACTGTTCGAGATGTACAAGAACGAAGAAGATCCTTTCTTCCCTGGATCTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_176612.p1 GENE.R_Transcript_176612~~R_Transcript_176612.p1 ORF type:complete len:637 (+),score=172.59 R_Transcript_176612:139-2049(+)
MDLNEIPRSDHMVIKRGIMREKLPKCDDDDQVRKCREIEEKGLALELEIGKKNMDLEEVKGRIRALEGEKVAIEDEIKGLMKKKADLELETPSVNEVIGGGDSSFDVWGAEESKIDQLMIENKVLECEKSSALKEVEVWKQKCKELEAKVLALEKRLSCRDVDSTSITAGQAVNNGDDGNNPRDLVSSSCIRGAGGGEAQLPGTPCIGTPQKRYVLIEDFQGVQPRTHVKRQLKFQNERIERKIAPSTLSGARSTSGPLVDISDSDDELLIARKHGSSSQSKGTPFVTRSGGLDEIDGISDQEETSDCKGNLLSRGKRKRGPKIVTSDDEDEVEEAHPRKQTLRVGNSDNEGEEDDTKPIKQDFSDFNIDNESDDDNIPISQLKRNHSQNSSRTVGLRTRSLSGLQANSVTDTSSRPRRRLVKSRQCRRSGRAQERETGSEKLVTDYVEDDKSEEEGSDNDTDSLGSFIVHDSDVGDVEDDVSEKEETDDSNELEDESDDNLDFEEIISRLQSRKIPNSKWDLEGDMLSDFGKNPELCMRAVCALYRQQTIDEKVCKESLLRNGRGFSKFDAQRGTGLGEFLTGGDLNGDLVKSVKELQEHDPCGLETCSRMARHYSKQLFEMYKNEEDPFFPGSS*

Click here to download the sequence:
Link to NCBI Protein BLAST