Transcript Information: R_Transcript_17677.p1


Annotated TAIR IDAT1G17745.2
Annotated Gene NameD-3-phosphoglycerate dehydrogenase
Annotated Gene Symbol(s)PGDH
Annotation TypeOrtholog
Chromosome Positionchr1:6101157-6104979 | Forward length=651
E-Value3.8e-310
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 144.67547876867
Replicate 237.162465995044
Replicate 338.679765048902
Condition 2: 8 Hour
Replicate 150.15962005625
Replicate 255.604759382854
Replicate 359.681586718987
Condition 3: 24 Hour
Replicate 150.047301202178
Replicate 245.456613394194
Replicate 348.536584571727


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17677.p1 GENE.R_Transcript_17677~~R_Transcript_17677.p1 ORF type:complete len:639 (+),score=117.34,2-Hacid_dh_C|PF02826.15|1.2e-63,2-Hacid_dh|PF00389.26|3.7e-35,ACT|PF01842.21|9.9e-10 R_Transcript_17677:148-2064(+)
ATGGCTTCAGCTACATCTGCTGCAAATTCCAAATCAATCTTCACATCTTGCTCCAACACCAATTTCATCCAAAACCAAAAGAGATCCAATCTCCACAACAATCTGTCATTTCTGAATAATGCATCCTCATCCACCTTCCCTAAACTCTCCCACACCCTATCATCCCCTCCTGTTCCCAAACCCAGTAGTAATAATTACATAAATGCCACCAGCACGGTGGACATCTCCACTATCGCCGGCCCGGCTTCGAGGGCTGGGATGGGCCGGGACCAGCAGAAGAGAACCCGGCCCGCGATCCTGGTCTCCGAGAAGCTGGGAGAGGCCGGGCTAGAGGTGCTGAGGGAGTTCGGGGACGTGGACTGCCTGTACGACCTGTCCCCGGACGAGCTCCGGTCGAAGATCTCGGGCTACGAGGCCCTGATCGTGCGGAGCGGGACGAAGGTGGACCGGGCCCTGTTCGAGGCGGCCCAGGGGAGGCTGAAGGTGGTGGGCCGGGCCGGGGTGGGGATAGACAATGTGGATCTGCAGGCGGCCACTGAGTACGGGTGCTTGGTGGTGAATGCTCCGACAGCGAACACGGTGGCGGCTGCTGAGCATGGGATCGCTCTGCTTACTGCCATGGCTAGGAATGTTGCTCAGGCTGATGCCTCCATGAAAGCTGGGAAATGGCAAAGGAGCAAGTACGTGGGAGTATCACTAGTGGGAAAGACCTTGGGAGTGATGGGATTTGGAAAGGTAGGATCAGAAGTTGCAAGACGTGCAAAAGGGCTTGGAATGCATGTCATTGCCCACGACCCTTATGCCCCAGCTGACAAAGCCCGGGCAGTTGGCGTAGAGTTGGTGTCCTTTGACCAAGCCATAGCCTCAGCTGACTTCCTCACGCTTCATATGCCTCTCACTCCTGCAACTAAGAAGGTGTTTAACGATGACACCTTCTCTAAGATGAAGAAAGGTGTTCGTATCATCAATGTTGCTCGAGGTGGTGTCATTGATGAAGATGCCTTAGTCAGGGCTCTTGACTCTGGTGTCGTTGCTCAGGCAGCACTTGACGTGTTCTCAGAGGAACCACCTGCCAAGGATAGCAAGTTGGTTCAGCATGAGAAAGTCACTGTCACACCTCATCTGGGAGCCAGCACCAAAGAAGCTCAGGAAGGTGTGGCTATTGAAATAGCAGAGGCTGTTACGGGAGCGTTAAAAGGAGAACTCTCCGCAACTGCAGTCAATGCCCCAATGGTTTCCCCTGAGGTTTTATCAGAATTGGCCCCATATGTCCAGTTAGCAGAGAAGCTAGGTAGGCTAGCAGTGCAGTTGGTGGCTGGAGGAAAGGGGATCAAGACAATCAAGGTCGTTTACAAATCAGCAAGAGGTCAAGATGACTTGGACACCAGACTTCTGAGAGCCATGATCACCAAAGGCATCATTGAGCCTATTTCCAACATGTACATCAACCTAGTCAATGCAGACTTCACTGCCAAGCAGAAGGGGCTCCGTATAAGTGAGGAGAAGGTATCAACAGACTCATCCCCTGAGAACCCAATTGACTCAATCGAAGTCCGGATAACCAACGTTGAGTCCAAATTCGATAGTGCAATCTCCGAGAAAGGGGATATAAGCATTGAAGGTAAAGTCAAGGACGGGATTCCCCGATTGACCTGTGTAGGGTCATTTGGGGTAGATGTCAGCCTGGAAGGGAACATTATGCTGTGCAGGCAAGTGGATCAGCCTGGCATGATCGGGAATGTTGGTAGCATTCTTGGTGAGAGTAACGTGAATGTGAGTTTCATGAGTGTTGGAAGGACACGCAGGGGGAAGAAGGCCATAATGGCAATTGGCATGGACGAAGAACCAGACAAGGATGCCCTAAAGAAGATCGGCCAAGTGCCTGCAGTTGAAGAGTTTGTATTCCTTAAGCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17677.p1 GENE.R_Transcript_17677~~R_Transcript_17677.p1 ORF type:complete len:639 (+),score=117.34,2-Hacid_dh_C|PF02826.15|1.2e-63,2-Hacid_dh|PF00389.26|3.7e-35,ACT|PF01842.21|9.9e-10 R_Transcript_17677:148-2064(+)
MASATSAANSKSIFTSCSNTNFIQNQKRSNLHNNLSFLNNASSSTFPKLSHTLSSPPVPKPSSNNYINATSTVDISTIAGPASRAGMGRDQQKRTRPAILVSEKLGEAGLEVLREFGDVDCLYDLSPDELRSKISGYEALIVRSGTKVDRALFEAAQGRLKVVGRAGVGIDNVDLQAATEYGCLVVNAPTANTVAAAEHGIALLTAMARNVAQADASMKAGKWQRSKYVGVSLVGKTLGVMGFGKVGSEVARRAKGLGMHVIAHDPYAPADKARAVGVELVSFDQAIASADFLTLHMPLTPATKKVFNDDTFSKMKKGVRIINVARGGVIDEDALVRALDSGVVAQAALDVFSEEPPAKDSKLVQHEKVTVTPHLGASTKEAQEGVAIEIAEAVTGALKGELSATAVNAPMVSPEVLSELAPYVQLAEKLGRLAVQLVAGGKGIKTIKVVYKSARGQDDLDTRLLRAMITKGIIEPISNMYINLVNADFTAKQKGLRISEEKVSTDSSPENPIDSIEVRITNVESKFDSAISEKGDISIEGKVKDGIPRLTCVGSFGVDVSLEGNIMLCRQVDQPGMIGNVGSILGESNVNVSFMSVGRTRRGKKAIMAIGMDEEPDKDALKKIGQVPAVEEFVFLKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST