Transcript Information: R_Transcript_176963.p1


Annotated TAIR IDAT5G53710.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21805409-21805753 | Reverse length=114
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.809015984359
Replicate 25.1611017783079
Replicate 35.2467946449288
Condition 2: 8 Hour
Replicate 16.4292494554219
Replicate 28.8694000599116
Replicate 311.661649281254
Condition 3: 24 Hour
Replicate 15.0019803457009
Replicate 25.544618156849
Replicate 310.026769744836


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_176963.p1 GENE.R_Transcript_176963~~R_Transcript_176963.p1 ORF type:complete len:179 (+),score=36.98,DUF4228|PF14009.2|1.2e-15 R_Transcript_176963:302-838(+)
ATGGGTAATTACATAGCTTTGTGCATGGTGGGAGAGTTACATTCCAAAGCACCCCTAATGAAGGAAGCTAGGCAAAAGGTTTTGCAAATCATGAAGTTTGATGGGAAGATATTGGAGTTTAAAACTACACTTTTGGTGAAAGATTTATTAGTGAATTACCCAAACTCTTATGTGGGTTTGTTCAAAGAAGCTACACAGCCCCTGCCTCTTGATTACATGTTGAAGATTGGCAAGATTTACTATCTTTTACCAACTTCAGTTGATGACACAAATCATAATAGTAATAACAAAAGCACTGAATCTTCTTCACAATCAAGCAAAGTAGTAGAAGGAAGAGCTAAGAGGATTAAAGTAGTTATAACAAAAGAGCAACTTCAACAGCTACTTGCGAAACAGGGTCATTTTGAAGAGCTTATTATCAAAGGGGTTACACCTCCAAACAGTGTATGTAGTTCTGATGAGTTTGGCTCTTCTTCTTCTTCTAATTGGCTGCCCAAGCTTGAGCCAGTTCCTGAAGGAAACAAGATAGTTTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_176963.p1 GENE.R_Transcript_176963~~R_Transcript_176963.p1 ORF type:complete len:179 (+),score=36.98,DUF4228|PF14009.2|1.2e-15 R_Transcript_176963:302-838(+)
MGNYIALCMVGELHSKAPLMKEARQKVLQIMKFDGKILEFKTTLLVKDLLVNYPNSYVGLFKEATQPLPLDYMLKIGKIYYLLPTSVDDTNHNSNNKSTESSSQSSKVVEGRAKRIKVVITKEQLQQLLAKQGHFEELIIKGVTPPNSVCSSDEFGSSSSSNWLPKLEPVPEGNKIVY*

Click here to download the sequence:
Link to NCBI Protein BLAST