Transcript Information: R_Transcript_177031.p1


Annotated TAIR IDAT1G78060.1
Annotated Gene NameGlycosyl hydrolase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29349796-29352868 | Reverse length=767
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.37609122846261
Replicate 20.28841072000409
Replicate 30
Condition 2: 8 Hour
Replicate 10.50451644808884
Replicate 20.64502543772651
Replicate 30.1246676553598
Condition 3: 24 Hour
Replicate 10.12614179795442
Replicate 20
Replicate 30.36078634099281


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_177031.p1 GENE.R_Transcript_177031~~R_Transcript_177031.p1 ORF type:5prime_partial len:728 (+),score=106.38,Glyco_hydro_3_C|PF01915.18|1.2e-48,Glyco_hydro_3|PF00933.17|7.7,Glyco_hydro_3|PF00933.17|2.7e-17,Fn3-like|PF14310.2|9.2e-08 R_Transcript_177031:2-2185(+)
CACCACAAGTGCACGAATTCTGGCAGGAATTCCCGTATAAAGACCAACCTTGAAAACATCAAAAACAATTCTCTTGCTTCTCTTCTCACTTCCCACTTATCTCATGTTATTGCTTACACCAACATGAGCCCTCTTCTTCTTCTTCTTCTTCAACTCACCCTCCTCCTGGTACTCCTCCGAGTCGACTCAGCTCCAACTCAGCCTCTGTTCGCCTGTGACTCGTCCAAAAACTCCTACCCATTTTGCAACACCAAACTGCCCATCCCCCAACGAGTGGAGGACCTGGTAACTCGTCTCAGCTTGGAGGAAAAGATAGCACAACTCACTAACTCGGCCCCGGCGCTTCCAAGACTCGGTATCCCAGCATACGAGTGGTGGTCAGAATCGTTACATGGGGTATCTAGGCACGGACGTGGGTACAGGTTTAATGGAACATTTGATGGGAATGGTACCATTATTAATGGGACTGCAATAATAAAGGCGGCTACCATGTTTCCTCAGATAATTCTCACTGCTGCTTCTTTTGATGCTCAGCTTTGGTACCGCATTGCCCGGGTGTCAAAGCAAGATTTGGCGGATACTTTCCAGCCTCCGTTTCAGAGTTGTGTGGAGCAAGGGCAAGCTAGCTCGATAATGTGTGCATACAATCGTGTGAATGGAGTCCCCAGTTGTGTGCATTCTGATTTCCTGACAGAGACAGCTAGAGGAAAGTGGCATTTTGATGGGTACATTGTTTCTGACTGTAATGCAGTGCCCATTATCTATCAACAGCAAGGATATTCAAAAACACCAGAAGATGCTGTTGCTGGAGTTCTAAAAGCAGGGATGGATGTGGAATGTGGCTCTTACACGCAGCGTTACACCAAATCAGCGCTTCAACAGAAAAAAATTACAAAAGCTGAAATAGATCAGGCACTTAAGAACCTGTTCTCTGTTCGTATGAGGTTAGGCCTTTTTGATGGAGATCCAAGGAACGCAAAGCCTTTTGGAAAGATTGATCCAAGCCAGGTCTGCTCTGACGAGCATCAGAATCTGGCGCTAGAAGCTGCCCAAAGCGGCATTGTCCTTCTCAAAAACTCTGACAATCTCCTCCCTATCTCAAAACCCAAAACCATTTCCATTGCTGTGATTGGCCCTAATGCCGATTCCCCTCAAGTTCTTCTTGGTAATTATGAAGGCAGTCCCTGTAAAACCACAACCACCCTTGAAGCATTACAACACTACGTGAAACAAGTGAAGTATCATCCTGGCTGCAACACTGTTGAATGTTCAGAAGCTTCAATAGAACAGACTCTGGACACGGTGAAAGACGTAGATTATGTAGTTTTGATCATGGGATTGGATCAAACACAGGAGAGGGAAAAAATGGACCGTGTAGACCTCAATCTACCTGGGAAGCAGCAGAGTCTGATAACAAGTGTAGCGGAAGCTGCAAAGAGACCTGTTGTGCTCGTGCTTCTCTGTGGTGGTCCAGTTGACATATCCTTAGCAAGGGATAATGTTAAAGTTGGAAGCATCCTGTGGGCTGGTTATCCTGGTGAAGCTGGGGGAACTGCTATTGCACAAGTCATCTTTGGTGATCATAACCCAGGAGGGAGACTGCCAGTGACCTGGTACCCACAAGATTTCGTTCAAGTACCCATGACAAATATGAGGATGAGGCCTGACAAATCTTCCGGCTACCCAGGACGAACATACCGTTTTTACCAGGGCAAGAAGATTTTCGAATTTGGTTATGGTCTGAGCTACTCCACCTATTCTTATGAATTTGCTTCAGTTACACGAGTTGAACTAAACTTGCCTCAGGCATCATATACTACCCATCTTCTTAACAACACGCAAATGAACCAGCCTAGTTTGGTCTCAGAGCTGGGCATGCAATTCTGTGACCAAGCAAAGTTCTCTGCAGCAGTCAGAGTGAAGAATAACGGGAAAATGGCAGGCAAACATCCAGTTTTGCTCTTTGTGAGGCCTGATGAGCCAAATGATGCGAGTCCCGTGAAACAGTTGATCGGATTTGAAAATATCAATTTGAACGGAGAAGAGGAGAAAGAAATTAAGTTTACTGTGAGTCCGTGCGAGCATCTCACCATGGCCAACAATGATGGGTTAATGGTGATTGACAAGGGTGTCTATTTCCTGGTAGTAGGGGAGGTAGAACACAAGATCACCATCCCAGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_177031.p1 GENE.R_Transcript_177031~~R_Transcript_177031.p1 ORF type:5prime_partial len:728 (+),score=106.38,Glyco_hydro_3_C|PF01915.18|1.2e-48,Glyco_hydro_3|PF00933.17|7.7,Glyco_hydro_3|PF00933.17|2.7e-17,Fn3-like|PF14310.2|9.2e-08 R_Transcript_177031:2-2185(+)
HHKCTNSGRNSRIKTNLENIKNNSLASLLTSHLSHVIAYTNMSPLLLLLLQLTLLLVLLRVDSAPTQPLFACDSSKNSYPFCNTKLPIPQRVEDLVTRLSLEEKIAQLTNSAPALPRLGIPAYEWWSESLHGVSRHGRGYRFNGTFDGNGTIINGTAIIKAATMFPQIILTAASFDAQLWYRIARVSKQDLADTFQPPFQSCVEQGQASSIMCAYNRVNGVPSCVHSDFLTETARGKWHFDGYIVSDCNAVPIIYQQQGYSKTPEDAVAGVLKAGMDVECGSYTQRYTKSALQQKKITKAEIDQALKNLFSVRMRLGLFDGDPRNAKPFGKIDPSQVCSDEHQNLALEAAQSGIVLLKNSDNLLPISKPKTISIAVIGPNADSPQVLLGNYEGSPCKTTTTLEALQHYVKQVKYHPGCNTVECSEASIEQTLDTVKDVDYVVLIMGLDQTQEREKMDRVDLNLPGKQQSLITSVAEAAKRPVVLVLLCGGPVDISLARDNVKVGSILWAGYPGEAGGTAIAQVIFGDHNPGGRLPVTWYPQDFVQVPMTNMRMRPDKSSGYPGRTYRFYQGKKIFEFGYGLSYSTYSYEFASVTRVELNLPQASYTTHLLNNTQMNQPSLVSELGMQFCDQAKFSAAVRVKNNGKMAGKHPVLLFVRPDEPNDASPVKQLIGFENINLNGEEEKEIKFTVSPCEHLTMANNDGLMVIDKGVYFLVVGEVEHKITIPE*

Click here to download the sequence:
Link to NCBI Protein BLAST