Transcript Information: R_Transcript_177032.p1


Annotated TAIR IDAT1G78060.1
Annotated Gene NameGlycosyl hydrolase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29349796-29352868 | Reverse length=767
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.83769627569965
Replicate 20.76073552232964
Replicate 31.1342708229979
Condition 2: 8 Hour
Replicate 10.68016291520126
Replicate 20.81017687830383
Replicate 31.1618784575852
Condition 3: 24 Hour
Replicate 11.0536191722859
Replicate 20.71919322469274
Replicate 30.89877048231221


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_177032.p1 GENE.R_Transcript_177032~~R_Transcript_177032.p1 ORF type:5prime_partial len:828 (+),score=118.95,Glyco_hydro_3_C|PF01915.18|1.6e-48,Glyco_hydro_3|PF00933.17|4e-39,Fn3-like|PF14310.2|1.1e-07 R_Transcript_177032:2-2485(+)
CACCACAAGTGCACGAATTCTGGCAGGAATTCCCGTATAAAGACCAACCTTGAAAACATCAAAAACAATTCTCTTGCTTCTCTTCTCACTTCCCACTTATCTCATGTTATTGCTTACACCAACATGAGCCCTCTTCTTCTTCTTCTTCTTCAACTCACCCTCCTCCTGGTACTCCTCCGAGTCGACTCAGCTCCAACTCAGCCTCTGTTCGCCTGTGACTCGTCCAAAAACTCCTACCCATTTTGCAACACCAAACTGCCCATCCCCCAACGAGTGGAGGACCTGGTAACTCGTCTCAGCTTGGAGGAAAAGATAGCACAACTCACTAACTCGGCCCCGGCGCTTCCAAGACTCGGTATCCCAGCATACGAGTGGTGGTCAGAATCGTTACATGGGGTATCTAGGCACGGACGTGGGTACAGGTTTAATGGAACATTTGATGGGAATGGTACCATTATTAATGGGACTGCAATAATAAAGGCGGCTACCATGTTTCCTCAGATAATTCTCACTGCTGCTTCTTTTGATGCTCAGCTTTGGTACCGCATTGCCCGGGCAATAGCAACTGAGGCAAGAGCAATGTACAATGTGGGACAAGGCAAGGGCTTAACATTTTGGGCACCAAACATAAACATATTTAGGGACCCAAGATGGGGAAGAGGCCAGGAAACCCCAGGAGAAGACCCTTTACTAACTTCCAGATATGGAGTTTCCTATGTAAGAGGCCTTCAAGGTTATACTTTTCAAGCAAACAAGATATCAGAGCATCTTCAAGCCTCTGCCTGCTGTAAGCACTTCACTGCTCATGATCTCGATAACTGGCATGGGGTTACTCGTTACACTTTTGATGCTCAAGTGTCAAAGCAAGATTTGGCGGATACTTTCCAGCCTCCGTTTCAGAGTTGTGTGGAGCAAGGGCAAGCTAGCTCGATAATGTGTGCATACAATCGTGTGAATGGAGTCCCCAGTTGTGTGCATTCTGATTTCCTGACAGAGACAGCTAGAGGAAAGTGGCATTTTGATGGGTACATTGTTTCTGACTGTAATGCAGTGCCCATTATCTATCAACAGCAAGGATATTCAAAAACACCAGAAGATGCTGTTGCTGGAGTTCTAAAAGCAGGGATGGATGTGGAATGTGGCTCTTACACGCAGCGTTACACCAAATCAGCGCTTCAACAGAAAAAAATTACAAAAGCTGAAATAGATCAGGCACTTAAGAACCTGTTCTCTGTTCGTATGAGGTTAGGCCTTTTTGATGGAGATCCAAGGAACGCAAAGCCTTTTGGAAAGATTGATCCAAGCCAGGTCTGCTCTGACGAGCATCAGAATCTGGCGCTAGAAGCTGCCCAAAGCGGCATTGTCCTTCTCAAAAACTCTGACAATCTCCTCCCTATCTCAAAACCCAAAACCATTTCCATTGCTGTGATTGGCCCTAATGCCGATTCCCCTCAAGTTCTTCTTGGTAATTATGAAGGCAGTCCCTGTAAAACCACAACCACCCTTGAAGCATTACAACACTACGTGAAACAAGTGAAGTATCATCCTGGCTGCAACACTGTTGAATGTTCAGAAGCTTCAATAGAACAGACTCTGGACACGGTGAAAGACGTAGATTATGTAGTTTTGATCATGGGATTGGATCAAACACAGGAGAGGGAAAAAATGGACCGTGTAGACCTCAATCTACCTGGGAAGCAGCAGAGTCTGATAACAAGTGTAGCGGAAGCTGCAAAGAGACCTGTTGTGCTCGTGCTTCTCTGTGGTGGTCCAGTTGACATATCCTTAGCAAGGGATAATGTTAAAGTTGGAAGCATCCTGTGGGCTGGTTATCCTGGTGAAGCTGGGGGAACTGCTATTGCACAAGTCATCTTTGGTGATCATAACCCAGGAGGGAGACTGCCAGTGACCTGGTACCCACAAGATTTCGTTCAAGTACCCATGACAAATATGAGGATGAGGCCTGACAAATCTTCCGGCTACCCAGGACGAACATACCGTTTTTACCAGGGCAAGAAGATTTTCGAATTTGGTTATGGTCTGAGCTACTCCACCTATTCTTATGAATTTGCTTCAGTTACACGAGTTGAACTAAACTTGCCTCAGGCATCATATACTACCCATCTTCTTAACAACACGCAAATGAACCAGCCTAGTTTGGTCTCAGAGCTGGGCATGCAATTCTGTGACCAAGCAAAGTTCTCTGCAGCAGTCAGAGTGAAGAATAACGGGAAAATGGCAGGCAAACATCCAGTTTTGCTCTTTGTGAGGCCTGATGAGCCAAATGATGCGAGTCCCGTGAAACAGTTGATCGGATTTGAAAATATCAATTTGAACGGAGAAGAGGAGAAAGAAATTAAGTTTACTGTGAGTCCGTGCGAGCATCTCACCATGGCCAACAATGATGGGTTAATGGTGATTGACAAGGGTGTCTATTTCCTGGTAGTAGGGGAGGTAGAACACAAGATCACCATCCCAGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_177032.p1 GENE.R_Transcript_177032~~R_Transcript_177032.p1 ORF type:5prime_partial len:828 (+),score=118.95,Glyco_hydro_3_C|PF01915.18|1.6e-48,Glyco_hydro_3|PF00933.17|4e-39,Fn3-like|PF14310.2|1.1e-07 R_Transcript_177032:2-2485(+)
HHKCTNSGRNSRIKTNLENIKNNSLASLLTSHLSHVIAYTNMSPLLLLLLQLTLLLVLLRVDSAPTQPLFACDSSKNSYPFCNTKLPIPQRVEDLVTRLSLEEKIAQLTNSAPALPRLGIPAYEWWSESLHGVSRHGRGYRFNGTFDGNGTIINGTAIIKAATMFPQIILTAASFDAQLWYRIARAIATEARAMYNVGQGKGLTFWAPNINIFRDPRWGRGQETPGEDPLLTSRYGVSYVRGLQGYTFQANKISEHLQASACCKHFTAHDLDNWHGVTRYTFDAQVSKQDLADTFQPPFQSCVEQGQASSIMCAYNRVNGVPSCVHSDFLTETARGKWHFDGYIVSDCNAVPIIYQQQGYSKTPEDAVAGVLKAGMDVECGSYTQRYTKSALQQKKITKAEIDQALKNLFSVRMRLGLFDGDPRNAKPFGKIDPSQVCSDEHQNLALEAAQSGIVLLKNSDNLLPISKPKTISIAVIGPNADSPQVLLGNYEGSPCKTTTTLEALQHYVKQVKYHPGCNTVECSEASIEQTLDTVKDVDYVVLIMGLDQTQEREKMDRVDLNLPGKQQSLITSVAEAAKRPVVLVLLCGGPVDISLARDNVKVGSILWAGYPGEAGGTAIAQVIFGDHNPGGRLPVTWYPQDFVQVPMTNMRMRPDKSSGYPGRTYRFYQGKKIFEFGYGLSYSTYSYEFASVTRVELNLPQASYTTHLLNNTQMNQPSLVSELGMQFCDQAKFSAAVRVKNNGKMAGKHPVLLFVRPDEPNDASPVKQLIGFENINLNGEEEKEIKFTVSPCEHLTMANNDGLMVIDKGVYFLVVGEVEHKITIPE*

Click here to download the sequence:
Link to NCBI Protein BLAST