Transcript Information: R_Transcript_177168.p1


Annotated TAIR IDAT5G48220.1
Annotated Gene NameAldolase-type TIM barrel family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19549930-19552046 | Forward length=379
E-Value9.4E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0914851093949
Replicate 21.4216245073535
Replicate 31.7895888746994
Condition 2: 8 Hour
Replicate 12.0404887456038
Replicate 22.3292585251235
Replicate 32.7416495207876
Condition 3: 24 Hour
Replicate 12.1522944275973
Replicate 21.9528093809365
Replicate 32.8499615477731


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_177168.p1 GENE.R_Transcript_177168~~R_Transcript_177168.p1 ORF type:internal len:192 (-),score=51.42,IGPS|PF00218.17|1.9e-46 R_Transcript_177168:3-575(-)
GAGGAAGTAGCTGCTAGCCAGGGCATAACAATTAGAAGACGGCCGGCAACAGGGCCTCCTTTGCACTATGTTGGTCCTTTTGAGTTTAGGATACAAAATGAAGGCAATACTCCCCGTAACATATTGGAGGAGATCATATGGTACAAGGACATAGAAGTCTCACAGCGGAAAGAAAAAAGGCCACTTGTTGCATTGAAGAAAGCCCTTGATGGTGCTCCTCCAACAAGGGATTTCATCGGCGCTCTAAGAGAAGCCCACCAGCGGACAACATTGCCTGGTTTGATTGCAGAAGTTAAGAAGGCTTCTCCAAGTAGAGGTGTCCTAAGAGAAAACTTTGATCCGGTTGAAATAGCGAAAGCTTATGAGAAAGGTGGAGCTGCTTGTCTCAGTGTTCTGACAGATGAGAAGTATTTCAAGGGAGGTTTTGAGAATCTGGAAGCCATACGCAGTGCTGGTGTGAAGTGTCCTCTACTATGTAAAGAATTTATAGTAGATGCTTGGCAAATACATTATGCTCGAGTCAAAGGGGCAGATGCTGTGCTTTTGATTGCTGGTGTTCTTTCTGATCTGGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_177168.p1 GENE.R_Transcript_177168~~R_Transcript_177168.p1 ORF type:internal len:192 (-),score=51.42,IGPS|PF00218.17|1.9e-46 R_Transcript_177168:3-575(-)
EEVAASQGITIRRRPATGPPLHYVGPFEFRIQNEGNTPRNILEEIIWYKDIEVSQRKEKRPLVALKKALDGAPPTRDFIGALREAHQRTTLPGLIAEVKKASPSRGVLRENFDPVEIAKAYEKGGAACLSVLTDEKYFKGGFENLEAIRSAGVKCPLLCKEFIVDAWQIHYARVKGADAVLLIAGVLSDLE

Click here to download the sequence:
Link to NCBI Protein BLAST