Transcript Information: R_Transcript_177169.p1


Annotated TAIR IDAT5G48220.1
Annotated Gene NameAldolase-type TIM barrel family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19549930-19552046 | Forward length=379
E-Value1.8E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.093557840791
Replicate 29.9456159866675
Replicate 313.412497671431
Condition 2: 8 Hour
Replicate 110.309837872524
Replicate 212.063107309061
Replicate 315.882659292839
Condition 3: 24 Hour
Replicate 120.239119529687
Replicate 215.670841843305
Replicate 320.735720229692


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_177169.p1 GENE.R_Transcript_177169~~R_Transcript_177169.p1 ORF type:3prime_partial len:152 (+),score=21.88 R_Transcript_177169:119-571(+)
ATGGAGGGAGTTATGGCAACGACACGGTCAACGCCCATCCCCGCAAAGCCGGGGGTTTCATTACCTCGATTGTCCATGAAAAGATCGAATCTGTGCATTACAATGGATTCCTCAAGACGTAATTTGCTCTTGGTTCGAGCTCAACAGTTGGAATCCAAGGAAACATCAGCGGTCACAGTTCCACCAATCAGCATTGCACCAGAGAATGCCCTTAAAGTTAAAGAATGGGAGGTGGGGAGGTTACAAGAGGAAGTAGCTGCTAGCCAGGGCATAACAATTAGAAGACGGCCGGCAACAGGGCCTCCTTTGCACTATGTTGGTCCTTTTGAGTTTAGGATACAAAATGAAGGCAATACTCCCCGTAACATATTGGAGGAGATCATATGGTACAAGGACATAGAAGTCTCACAGCGGAAAGAAAAAAGGCCACTTGTTGCATTGAAGAAAGCCCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_177169.p1 GENE.R_Transcript_177169~~R_Transcript_177169.p1 ORF type:3prime_partial len:152 (+),score=21.88 R_Transcript_177169:119-571(+)
MEGVMATTRSTPIPAKPGVSLPRLSMKRSNLCITMDSSRRNLLLVRAQQLESKETSAVTVPPISIAPENALKVKEWEVGRLQEEVAASQGITIRRRPATGPPLHYVGPFEFRIQNEGNTPRNILEEIIWYKDIEVSQRKEKRPLVALKKAL

Click here to download the sequence:
Link to NCBI Protein BLAST