Transcript Information: R_Transcript_177348.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value1E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1762693076657
Replicate 23.1177801082206
Replicate 33.8266475798677
Condition 2: 8 Hour
Replicate 13.2382698422111
Replicate 23.6316977468283
Replicate 32.9059423034958
Condition 3: 24 Hour
Replicate 16.0723666449148
Replicate 24.0426112583657
Replicate 35.3322714434437


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_177348.p1 GENE.R_Transcript_177348~~R_Transcript_177348.p1 ORF type:complete len:431 (+),score=50.24,zf-RVT|PF13966.2|5.7e-15,zf-RVT|PF13966.2|1.2e+04,RVT_3|PF13456.2|5.4e-10 R_Transcript_177348:162-1454(+)
ATGAGGAATCCGGATTCTCTGATGGCGCGAGTGCTCAAGGCGAGGTATTTTCCCAAAAGCGATATCTTGCAGGCAAACATGGGTTATCGTCCAAGTTATGTATGGAGGAGTTTAATGAGTGCAAAGTGGGTGATAGAGAAAGGGTGTCGGTGGGTGGTGGGAAATGGAAAGGATATTGGGGTCTGGAAGGATAAGTGGATGTCTCGACCTGGGAGTTTCAAAGTGCTCTCCCCACCTAAAAGGGGTCACGAGAACATGCTAGTGGCAGACCTTATCATGGAGGGGGAAGGCCAGTGGAATGAAGAGAGGGTAAGGAGTATATTTTTGCCTTTTGAAGCCGAGGAGATACTGAATATCCCCTTGAGTAGGCATGGGCAACAGGATGTTTTGTCGTGGGCATTCACAAAGGATGGTTTCTACTCGGTGCGATCGGGCTATCACTTTGTACGTTGGGATCTTGGTCGCCGAGAGGAGGCTACAACTTCAGAGGTTACGAAAGAGCCATGGAAGACCCTTTGGACCCTGGACGTCCCCCCGAAGGTTCGAAATTTTGGGTGGAGATTGGTTAGTAGAGCGCTCCCCTGTAGAGAAAATCTGAGTAGGCGCCTTCAAAGTGTGGATCCTACCTGTTTTCGTTGCGGACGAGGAGCGGAAACGGAGCTGCACGCTGTATGTTTTTGCCCAACTGTGATTGGCATGTGGGAGGATGCAGGCCTAGCAGAAGTGGTGGAGGAGGACCGTTCCGTCTTGGTAGCAGAGTGGCTTGATGGGTGGCGCAGGAGAAGCTCAAGACACGTATTTGAGAAGATAATTATGCTAGCTTGGGCTGCATGGGGGTGGAGAAATGAGTCCCTTTTTAACGCTAAAGTGCGTAACTCCCAGGAGGTTACTAATAGTGCTATGCAATGCTTATTAGCATACAAAGGGGCAAACGTTAAAGACATGAAAAGCTCAACTAGGACCACGACATGCTGGACTGCACCTAGAGAAGATTTTGTCAAAATAAATGTAGATGCTGGAGTGTTGGGAAAAGAGGGGACAGGTATGGGTATAATAATCCGAGATAGCCAAGGCGGTGTGATGTGTGCTGCTGTGAGACAAATAAAAGCAACCTGGAGACCAGATGAAGCTGAGGCAATGGCAATCTTGGTTGGTCTTAAACAAGGTATTCAATGTGGGCAGCGGAAAGTAATACTGGAAGGGGATTGTCTGACAATTATTAACTTGCTCAAGAAGAAGATAAAGCCGAATAACACTCTTGGTCATATTCTTGAGGACATTTATAATTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_177348.p1 GENE.R_Transcript_177348~~R_Transcript_177348.p1 ORF type:complete len:431 (+),score=50.24,zf-RVT|PF13966.2|5.7e-15,zf-RVT|PF13966.2|1.2e+04,RVT_3|PF13456.2|5.4e-10 R_Transcript_177348:162-1454(+)
MRNPDSLMARVLKARYFPKSDILQANMGYRPSYVWRSLMSAKWVIEKGCRWVVGNGKDIGVWKDKWMSRPGSFKVLSPPKRGHENMLVADLIMEGEGQWNEERVRSIFLPFEAEEILNIPLSRHGQQDVLSWAFTKDGFYSVRSGYHFVRWDLGRREEATTSEVTKEPWKTLWTLDVPPKVRNFGWRLVSRALPCRENLSRRLQSVDPTCFRCGRGAETELHAVCFCPTVIGMWEDAGLAEVVEEDRSVLVAEWLDGWRRRSSRHVFEKIIMLAWAAWGWRNESLFNAKVRNSQEVTNSAMQCLLAYKGANVKDMKSSTRTTTCWTAPREDFVKINVDAGVLGKEGTGMGIIIRDSQGGVMCAAVRQIKATWRPDEAEAMAILVGLKQGIQCGQRKVILEGDCLTIINLLKKKIKPNNTLGHILEDIYNC*

Click here to download the sequence:
Link to NCBI Protein BLAST