Transcript Information: R_Transcript_177380.p3


Annotated TAIR IDAT1G47350.1
Annotated Gene NameF-box associated ubiquitination effector family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:17358447-17360722 | Reverse length=528
E-Value8E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.12719833417922
Replicate 20.21947352351531
Replicate 30.15962883342267
Condition 2: 8 Hour
Replicate 10.25594980781093
Replicate 20.38956240141438
Replicate 30.50596824028953
Condition 3: 24 Hour
Replicate 10.31996943871365
Replicate 20.30739036781292
Replicate 30.53384645577798


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_177380.p3 GENE.R_Transcript_177380~~R_Transcript_177380.p3 ORF type:complete len:287 (+),score=54.34,Retrotrans_gag|PF03732.13|2.4e-14 R_Transcript_177380:270-1130(+)
ATGGTGAATACTCGGAATACACTTGTTGATGAGGCCACTAGAGCTTTCATTACAGAAGCTATAAACTCTGCAATGGCTACTGCACTGGCTACTGCATTGGATCAAAGTCCCAGGATCGTGGAACTCTCTGGCCAGGTCACGGGTCTAAGCCTGCAACATCATGAACTGGCTAATCAGGTTAATCAACTTAGAGGCAACCCAGGTAATCCTAATTCCATTTCTGTTAATGGCTATGGTAGATTATCTAGAGTTGATTTTCCAAATTTCAATGGTGAAAATGTCAAGAATTGGTTGTACAAATGCAAATTGTTTTTTGAAGTAGACAACATATTGGAAGTAAATAAGGTGAAAATAGCATCAATACATCTAGAAGATAGGGCTTTGTCGTGGCATCAAAACTTCATGAAGGGAAGAGGTAATAATTGGCCTAATTGGGATGAATATGCTGAGGCTATTTCTGTCAGATTTGGTAATGCCTATGAGGACCCAATGGCTGAATTAAAGAATTTGAAACAAGAAGATACTGTGCAGAAGTATCAAGATGCTTTTGAATTGTTGTTGAATAAGGTGGATTTGAATGAAGATTATGCTGTGAGTTTGTATATGGGTGGATTGATGGAGGAGATTGCTATGTCAGTGAGGATGTTCAGGCCTAAAACTTTGTCTGATGCTTATTGCTTGGCCAAATTACAAGAAGCCACCTTAAATGCAACAAAAAAGAGGGCCAAACCCATTTTACCCATGCCTAAAACACCTCCAACCAATCCAGGCCTTCCAACTTCAGACCTTTCACTAACATTACAAATACTCCTCCAAAACCAGCTTTACCTGCACCACCTTCCAAACCCATTAATAGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_177380.p3 GENE.R_Transcript_177380~~R_Transcript_177380.p3 ORF type:complete len:287 (+),score=54.34,Retrotrans_gag|PF03732.13|2.4e-14 R_Transcript_177380:270-1130(+)
MVNTRNTLVDEATRAFITEAINSAMATALATALDQSPRIVELSGQVTGLSLQHHELANQVNQLRGNPGNPNSISVNGYGRLSRVDFPNFNGENVKNWLYKCKLFFEVDNILEVNKVKIASIHLEDRALSWHQNFMKGRGNNWPNWDEYAEAISVRFGNAYEDPMAELKNLKQEDTVQKYQDAFELLLNKVDLNEDYAVSLYMGGLMEEIAMSVRMFRPKTLSDAYCLAKLQEATLNATKKRAKPILPMPKTPPTNPGLPTSDLSLTLQILLQNQLYLHHLPNPLIG*

Click here to download the sequence:
Link to NCBI Protein BLAST