Transcript Information: R_Transcript_178059.p1


Annotated TAIR IDAT1G12700.1
Annotated Gene NameATP binding;nucleic acid binding;helicases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4323722-4326227 | Reverse length=735
E-Value4E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47782620300311
Replicate 20.21985654886176
Replicate 30.11993056333064
Condition 2: 8 Hour
Replicate 10.51279298318838
Replicate 20.11707267979678
Replicate 30.76027688462354
Condition 3: 24 Hour
Replicate 10.36059383080163
Replicate 20.46189023854612
Replicate 30.45838124998738


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_178059.p1 GENE.R_Transcript_178059~~R_Transcript_178059.p1 ORF type:internal len:191 (+),score=36.42,PPR_2|PF13041.2|4.5e-21,PPR_2|PF13041.2|4.3e-17,PPR_2|PF13041.2|4.7e-11,PPR_2|PF13041.2|1.6e-17,PPR_2|PF13041.2|2.2e-07,PPR_1|PF12854.3|1.5e-16,PPR_1|PF12854.3|1.7e-13,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|2.4e-10,PPR_1|PF12854.3|2.7e-07,PPR_1|PF12854.3|3.9e+03,PPR|PF01535.16|9e-10,PPR|PF01535.16|3.3e-08,PPR|PF01535.16|0.057,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|0.00027,PPR_3|PF13812.2|3.2e-08,PPR_3|PF13812.2|1.1e-07,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|0.00017,PPR_3|PF13812.2|0.05,MRP-S27|PF10037.5|0.099,MRP-S27|PF10037.5|0.01 R_Transcript_178059:2-571(+)
GGCCTCTCACCTAATGTTTGTACCTACAGTACTCTCATTGATGGCTTGTGCAAGAGCAATAGACTTGAATCAGCTTTCCAACTTTTCGAGGAAATGAAAGCTCTTGGACTACATCCAGATGTTGTCACATATGCTTCGTTGCTTGATGGTCTTTGTAAAAATGCACGAATTGAAGAGGCTAGAGAATTGTTCGAGGACATGATGAAGAATGGAGTGGTTCCTAATCAATCGATTTATGTTATTTTTCTTAATGCTTTGTGCGAAGCTCGTAGATTTACAGAGGCAGAGGACATCTTCTCTTTTCTTTTAACCAAGGGGTTAAAACCAAATGTGCACATTTATACCATAATGATCAAAGGACTTTGCAAACAAAGGAAGATGGATGCTGCCATTGAACTAACATCGAAAATGGAGGAAAATGGATGTGCACCTGATGATTGCACTTACAACACAATTATTAGAGGACTTATTCAGGGGAATGATCTCAAAAAAGCTTTGGAGCTTGTCACCATTATGACTGCCAAAGGTTTTGCAGCTGATGCTAGCACTTATGTTTTATTTATCAACTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_178059.p1 GENE.R_Transcript_178059~~R_Transcript_178059.p1 ORF type:internal len:191 (+),score=36.42,PPR_2|PF13041.2|4.5e-21,PPR_2|PF13041.2|4.3e-17,PPR_2|PF13041.2|4.7e-11,PPR_2|PF13041.2|1.6e-17,PPR_2|PF13041.2|2.2e-07,PPR_1|PF12854.3|1.5e-16,PPR_1|PF12854.3|1.7e-13,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|2.4e-10,PPR_1|PF12854.3|2.7e-07,PPR_1|PF12854.3|3.9e+03,PPR|PF01535.16|9e-10,PPR|PF01535.16|3.3e-08,PPR|PF01535.16|0.057,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|0.00027,PPR_3|PF13812.2|3.2e-08,PPR_3|PF13812.2|1.1e-07,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|0.00017,PPR_3|PF13812.2|0.05,MRP-S27|PF10037.5|0.099,MRP-S27|PF10037.5|0.01 R_Transcript_178059:2-571(+)
GLSPNVCTYSTLIDGLCKSNRLESAFQLFEEMKALGLHPDVVTYASLLDGLCKNARIEEARELFEDMMKNGVVPNQSIYVIFLNALCEARRFTEAEDIFSFLLTKGLKPNVHIYTIMIKGLCKQRKMDAAIELTSKMEENGCAPDDCTYNTIIRGLIQGNDLKKALELVTIMTAKGFAADASTYVLFINL

Click here to download the sequence:
Link to NCBI Protein BLAST