Transcript Information: R_Transcript_178062.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value3E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.51904154373608
Replicate 20.49754266389332
Replicate 30.86850189938019
Condition 2: 8 Hour
Replicate 10.69628051982688
Replicate 20.63585445993893
Replicate 30.68821272494358
Condition 3: 24 Hour
Replicate 10.7616334151371
Replicate 20.20905458664054
Replicate 30.6223991854094


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_178062.p1 GENE.R_Transcript_178062~~R_Transcript_178062.p1 ORF type:complete len:211 (+),score=31.18,PPR_2|PF13041.2|2.1e-21,PPR_2|PF13041.2|8.4e-13,PPR_2|PF13041.2|6.3e-16,PPR_2|PF13041.2|2.8e-06,PPR_2|PF13041.2|1.5e-06,PPR_1|PF12854.3|1.7e-16,PPR_1|PF12854.3|1e-10,PPR_1|PF12854.3|5.7e-11,PPR_1|PF12854.3|0.0001,PPR_1|PF12854.3|0.00022,PPR|PF01535.16|6.7e-10,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.00047,PPR_3|PF13812.2|5.1e-08,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|0.17,MRP-S27|PF10037.5|2.5e+02,MRP-S27|PF10037.5|0.22,MRP-S27|PF10037.5|0.0068 R_Transcript_178062:95-634(+)
ATGAAAACTCATGGACTACATCCAAATGCTGTCACATATGGTTCGTTGCTTGATGGTCTTTGTAAAAATGCACAAGTTGACGAGGCCATATCAATGCTAAAGCAATTGGACATAAATGGAGTGGTCCCTACCATTACCACCTTCAATATCTTAATTGATGGTTTATGTCAAGTAGGAAGACTTGAAGAAGCAGCAAGTTTCTTCTCTTCCCTCAAGGGAAGGGGTTTGCAACCAGATCAGTACACGTTCCATATAATGATCAGAGGACTTCGTAAGCAAAGGAAGCTAAATGATGCTAGTAAACTACTAAGGATAATGGAGGGTATGGGATGTCTACCTGACGGTTGCACGTACAACGTTATTATTAGAGGTTTTCTTTATGCTAAGAATATCAAAAAGGCTTTGGATCTTGTTAAGATTATGACAGGCAGAGGATTCATGGCTGATGCTAGCACCACATCGTTATTTTTTGACTTTATATCTTCTCATAAGGTTAGCAGTGCAGACAAGGCATTGCTTCAGAAGTTTTTTCAGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_178062.p1 GENE.R_Transcript_178062~~R_Transcript_178062.p1 ORF type:complete len:211 (+),score=31.18,PPR_2|PF13041.2|2.1e-21,PPR_2|PF13041.2|8.4e-13,PPR_2|PF13041.2|6.3e-16,PPR_2|PF13041.2|2.8e-06,PPR_2|PF13041.2|1.5e-06,PPR_1|PF12854.3|1.7e-16,PPR_1|PF12854.3|1e-10,PPR_1|PF12854.3|5.7e-11,PPR_1|PF12854.3|0.0001,PPR_1|PF12854.3|0.00022,PPR|PF01535.16|6.7e-10,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.00047,PPR_3|PF13812.2|5.1e-08,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|0.17,MRP-S27|PF10037.5|2.5e+02,MRP-S27|PF10037.5|0.22,MRP-S27|PF10037.5|0.0068 R_Transcript_178062:95-634(+)
MKTHGLHPNAVTYGSLLDGLCKNAQVDEAISMLKQLDINGVVPTITTFNILIDGLCQVGRLEEAASFFSSLKGRGLQPDQYTFHIMIRGLRKQRKLNDASKLLRIMEGMGCLPDGCTYNVIIRGFLYAKNIKKALDLVKIMTGRGFMADASTTSLFFDFISSHKVSSADKALLQKFFQN*

Click here to download the sequence:
Link to NCBI Protein BLAST