Transcript Information: R_Transcript_178100.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value7E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26326385992383
Replicate 20.3028312560043
Replicate 30.66077127681209
Condition 2: 8 Hour
Replicate 10.94176403643251
Replicate 20.64502543772651
Replicate 31.0472083050223
Condition 3: 24 Hour
Replicate 11.3244888785214
Replicate 20.10603489851239
Replicate 30.21045869891247


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_178100.p1 GENE.R_Transcript_178100~~R_Transcript_178100.p1 ORF type:5prime_partial len:208 (+),score=32.29 R_Transcript_178100:1-624(+)
AGTATCCCCCTGTACTATTTATCCTTGTTTCGTATCCCAAAGTCCGTGGCAATGCAATTAGAGAAGTTGATGAGGGACTTCTTATGGCATGGCTCGTTGGGTGATAGGAGGGACCACTTGGTTGACTGGAATACGGTGTGTAAGTCGAAGGAAGATGGAGGATTGGGGGTTGGTAGGTTGGTGTTGCGGAATATTGCTCTTGTGGGTAAGTGGTTGTGGCGGTTTCCGTTGGAACCTAACTCGCTTGGGCACCAAGTGATGGGGTTGCATTTGAGTGATGGGAGCAGGATTCGGTTTTGGGAGGATGTGTGGAGAGGAGATGTGTCTTTTATGGAGCGGTTTCCCCGCATTTATCGGCTCTCTACTCTTCAAGAGGCTGTCGTGGCCCAATTCTTTGATGGTGGGGCATTGAACCTGCATTTACAGAGGTCGATTAGAGATCTGGAAATGGATGAGTTGTCTACTCTATTGGGAATTCTGGATGGGGTGGTGCTCTCTGACGTGGAGGATAGGCGGACTTGGAAAGCGGATTCTTCAGGGATCTCCTCGTGCGCTTTTTTCCTGCGTTCCTTGCAAGGTCATGCTGGAAGTTCTTTCTCTCGACATGCGTCTCATGTGTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_178100.p1 GENE.R_Transcript_178100~~R_Transcript_178100.p1 ORF type:5prime_partial len:208 (+),score=32.29 R_Transcript_178100:1-624(+)
SIPLYYLSLFRIPKSVAMQLEKLMRDFLWHGSLGDRRDHLVDWNTVCKSKEDGGLGVGRLVLRNIALVGKWLWRFPLEPNSLGHQVMGLHLSDGSRIRFWEDVWRGDVSFMERFPRIYRLSTLQEAVVAQFFDGGALNLHLQRSIRDLEMDELSTLLGILDGVVLSDVEDRRTWKADSSGISSCAFFLRSLQGHAGSSFSRHASHVS*

Click here to download the sequence:
Link to NCBI Protein BLAST