Transcript Information: R_Transcript_178101.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11198135555042
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.27061667350402
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_178101.p1 GENE.R_Transcript_178101~~R_Transcript_178101.p1 ORF type:5prime_partial len:163 (+),score=12.88 R_Transcript_178101:2-490(+)
GGGACCCGGTGGTGGAAAGGGCTACTCGTCGGTTGGAGGGGTGGCAGGGTGCCTATTTCTCCTTCGGTGGGCGCATTACTATGTTACAGTCGTGCTTGTCCAGTATCCCCCTGTATTTTCTATCCTTGTTTCGCATCCCTGAAGTTCGTGGCGCTGAAATTAGAGAAATTGATGAGGAACTTCTTATGGCATGGCTCGTCTGGTGATAGGAGGGACCACTTGGTTGATTGGAATACGGTGTGTAAGCCTAAGGAAGATGGAGGTTTGGGGGTTGGTAGGTTGGTGTTGAGGAATCTAGCTCTTATGAGCAAGTGGCTATGGCGATTTCCGTTGGAGCCTAACTCGCTTTGGCATAAGGTGATTCGGAGTCGTTATGGTGATCTTCGTCTGGGGTGGGATGTTTTGGCGACTTCGAGGTCTACCCATGCCTCCCCTTGGAAGTTTGTCTCCCAGGTGGCTATTTTCTTCCTTCCTCTGGTGGGGCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_178101.p1 GENE.R_Transcript_178101~~R_Transcript_178101.p1 ORF type:5prime_partial len:163 (+),score=12.88 R_Transcript_178101:2-490(+)
GTRWWKGLLVGWRGGRVPISPSVGALLCYSRACPVSPCIFYPCFASLKFVALKLEKLMRNFLWHGSSGDRRDHLVDWNTVCKPKEDGGLGVGRLVLRNLALMSKWLWRFPLEPNSLWHKVIRSRYGDLRLGWDVLATSRSTHASPWKFVSQVAIFFLPLVGL*

Click here to download the sequence:
Link to NCBI Protein BLAST