Transcript Information: R_Transcript_178120.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value9E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.033186469135
Replicate 20.92436542713262
Replicate 31.1525402564102
Condition 2: 8 Hour
Replicate 10.92399490366963
Replicate 20.56253790795435
Replicate 31.0274496577578
Condition 3: 24 Hour
Replicate 11.1551097976203
Replicate 21.6645478407983
Replicate 31.2389266803904


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_178120.p1 GENE.R_Transcript_178120~~R_Transcript_178120.p1 ORF type:internal len:159 (-),score=50.05 R_Transcript_178120:2-475(-)
GAGGTGTCGGACCTCAAGAACAAGTTGGCAGCCGTAAGCAATGAGAAAGCTACTCTTGAATCAGACTATATGACAATGTCTAGCAAGCTAGAGAGTTCTGAAAAAATTGTCGAAGAATTGAAGGCAGAAGCTGAAAGATTAAATCAAGAGAAATCAGAGGTGGTGGGAGAGAACGAAGAACTAAGAATGAGAGTAGAGTGTGCAGCTAAGACAGAAGTTGGATTGAATCAACAAATTGAAGAACTGAAAAAGGAGAGAGATGATGCAAAAGAAGATGCCATGAAAAGGGCTAAAGATGGAGCTCAAAGTGTTGAAAACTTTAGAACCCAGGTTGAGCAGTTGCAGAGCGAGAAACAGAGCCTCGAGCTTGAATTGGGAACCGTGAAGCAAAAAGTTTTTGCTCCAGAAGAGGAATTGTCCTCGGCAAAAGAGGAATCAGAGAACTTAAGTAAGTCTATGGAAGCTGCTAAACAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_178120.p1 GENE.R_Transcript_178120~~R_Transcript_178120.p1 ORF type:internal len:159 (-),score=50.05 R_Transcript_178120:2-475(-)
EVSDLKNKLAAVSNEKATLESDYMTMSSKLESSEKIVEELKAEAERLNQEKSEVVGENEELRMRVECAAKTEVGLNQQIEELKKERDDAKEDAMKRAKDGAQSVENFRTQVEQLQSEKQSLELELGTVKQKVFAPEEELSSAKEESENLSKSMEAAKQ

Click here to download the sequence:
Link to NCBI Protein BLAST