Transcript Information: R_Transcript_178122.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.935314635269
Replicate 217.464212495799
Replicate 320.12367601905
Condition 2: 8 Hour
Replicate 115.332270574443
Replicate 223.823743270048
Replicate 316.115915971372
Condition 3: 24 Hour
Replicate 123.386925119811
Replicate 225.971613273016
Replicate 316.978312981425


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_178122.p1 GENE.R_Transcript_178122~~R_Transcript_178122.p1 ORF type:internal len:107 (+),score=30.88 R_Transcript_178122:3-320(+)
ATCATGACCAGCAAGTTTGAGGAGGACCACGGCAAGTTTTCTAACAACATTTTCAAGATATCCCAAGAGATTCAGGGCGTAAAGCGTTGTTTAGCAGGAAAGAATATCGAGAGAGAACAGCTGGAGAAGGAGCTAGGCGATGTAAATGAGAGGTTCAAGAAGCAATATCAAGAGATGGAGGAGTTGCAACGTGCAGTTAGCCAACTGAAGAAGGGGGCAGGAGAGCTGGATATGACATTGAAAGAGAAGGATGAGAGACTTTCAACTCTGGGAGAGGAGAAACGTCAGGCCATAAGGCACCTGTGCTTGTGGAGTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_178122.p1 GENE.R_Transcript_178122~~R_Transcript_178122.p1 ORF type:internal len:107 (+),score=30.88 R_Transcript_178122:3-320(+)
IMTSKFEEDHGKFSNNIFKISQEIQGVKRCLAGKNIEREQLEKELGDVNERFKKQYQEMEELQRAVSQLKKGAGELDMTLKEKDERLSTLGEEKRQAIRHLCLWSD

Click here to download the sequence:
Link to NCBI Protein BLAST