Transcript Information: R_Transcript_178123.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3687048567192
Replicate 21.6027710241449
Replicate 31.2240241463593
Condition 2: 8 Hour
Replicate 11.8691499959729
Replicate 22.0483250541544
Replicate 31.1084953050618
Condition 3: 24 Hour
Replicate 13.6802591739068
Replicate 21.0101645293394
Replicate 31.8378988668387


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_178123.p1 GENE.R_Transcript_178123~~R_Transcript_178123.p1 ORF type:5prime_partial len:131 (+),score=32.15 R_Transcript_178123:3-395(+)
ATCATGACCAGCAAGTTTGAGGAGGACCACGGCAAGTTTTCTAACAACATTTTCAAGATATCCCAAGAGATTCAGGGCGTAAAGCGTTGTTTAGCAGGAAAGAATATCGAGAGAGAACAGCTGGAGAAGGAGCTAGGCGATGTAAATGATAGGGTCAAGAAGCAAAATGGAGAGATGGAGGAGTTGCAACGTGCAGTTAGCCAACTGACGAAAGCAGCAGGAGAGCTCAATGTGACATTGAAGGAAAAAGATGAGCAACTTTCAAGTCTTGCGGAGGAGAAACGCCAGGCCATCAGGCAACTGTGCTTATGGAGCGATAATCTCCAGGGTCACTATGATGAACTAAAGAGCATTGTGTCAAAGGCAACTTCAGAGAGGCGGGTGAGTAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_178123.p1 GENE.R_Transcript_178123~~R_Transcript_178123.p1 ORF type:5prime_partial len:131 (+),score=32.15 R_Transcript_178123:3-395(+)
IMTSKFEEDHGKFSNNIFKISQEIQGVKRCLAGKNIEREQLEKELGDVNDRVKKQNGEMEELQRAVSQLTKAAGELNVTLKEKDEQLSSLAEEKRQAIRQLCLWSDNLQGHYDELKSIVSKATSERRVSR*

Click here to download the sequence:
Link to NCBI Protein BLAST