Transcript Information: R_Transcript_178127.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value1E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3657942186006
Replicate 20.44672979609145
Replicate 32.2744278464265
Condition 2: 8 Hour
Replicate 10.86829308323565
Replicate 21.7444659592414
Replicate 30.9011437896646
Condition 3: 24 Hour
Replicate 13.4192478849772
Replicate 21.7206230340167
Replicate 32.4837111701444


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_178127.p1 GENE.R_Transcript_178127~~R_Transcript_178127.p1 ORF type:internal len:141 (+),score=47.04 R_Transcript_178127:2-421(+)
AGTTCTGAAAAAATTGTTGAAGAATTGAAGGCAGAAGCTGAAAGAATAAATCAAGAGAAATCAGAGGTGGTGGGAGAGAACGAAGAACTGAGAATGAGAGTAGAGAGTGCAGCTAAGACAGAAGTTGAATTGAATCAACAAATTGAAGAACTGAAAAAGGAGAGAGATGATATAGTCGTTGCAAAAGAAGATGCGATGAAAAGGGCCGAAGTTGGAACTCAAAGTGTTGAAAACCTTAAAACCCAGGTTGGGCATTTGCAGAGCGAGAAACAGAGCCTCGAGCTTGAAGTGGGAACCGTGAAGCAAAAAGTTTGTGCTCTAGGAGAAGAATTGATCTCGGCAAAAGAGGAATCAGAGAACTTGAGTAAGTCTATGGAAGCTGCTAAAGAGGAAAATATTAGTCTCTCTGAGAAAATTGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_178127.p1 GENE.R_Transcript_178127~~R_Transcript_178127.p1 ORF type:internal len:141 (+),score=47.04 R_Transcript_178127:2-421(+)
SSEKIVEELKAEAERINQEKSEVVGENEELRMRVESAAKTEVELNQQIEELKKERDDIVVAKEDAMKRAEVGTQSVENLKTQVGHLQSEKQSLELEVGTVKQKVCALGEELISAKEESENLSKSMEAAKEENISLSEKIA

Click here to download the sequence:
Link to NCBI Protein BLAST