Transcript Information: R_Transcript_17823.p1


Annotated TAIR IDAT5G19820.1
Annotated Gene NameARM repeat superfamily protein
Annotated Gene Symbol(s)emb2734
Annotation TypeOrtholog
Chromosome Positionchr5:6695731-6701247 | Reverse length=1116
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.940012400006
Replicate 220.78953290996
Replicate 323.583480962914
Condition 2: 8 Hour
Replicate 123.49941559843
Replicate 227.625798514625
Replicate 332.110637946181
Condition 3: 24 Hour
Replicate 127.931656242122
Replicate 225.490903516325
Replicate 331.234557986495


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17823.p1 GENE.R_Transcript_17823~~R_Transcript_17823.p1 ORF type:complete len:1117 (+),score=309.43,HEAT_2|PF13646.2|0.13,HEAT_2|PF13646.2|0.37,HEAT_2|PF13646.2|8.1,HEAT_2|PF13646.2|4.4e-10,HEAT_2|PF13646.2|4.2,HEAT_2|PF13646.2|9.5,HEAT_2|PF13646.2|0.0013,HEAT|PF02985.18|1.2e+04,HEAT|PF02985.18|38,HEAT|PF02985.18|0.035,HEAT|PF02985.18|1.2,HEAT|PF02985.18|6.4e+03,HEAT|PF02985.18|0.081,HEAT|PF02985.18|0.0011,HEAT|PF02985.18|8.2,HEAT|PF02985.18|2.9e+03,HEAT|PF02985.18|1.4e+02,HEAT|PF02985.18|1.2e+03,HEAT|PF02985.18|9e+03,HEAT|PF02985.18|1.3e-06,HEAT|PF02985.18|5.9e+02,HEAT_EZ|PF13513.2|9e+03,HEAT_EZ|PF13513.2|1.4e+02,HEAT_EZ|PF13513.2|10,HEAT_EZ|PF13513.2|0.37,HEAT_EZ|PF13513.2|4.7e+03,HEAT_EZ|PF13513.2|4.8e+03,HEAT_EZ|PF13513.2|6e+03,HEAT_EZ|PF13513.2|7.2e-06,HEAT_EZ|PF13513.2|2.4e+03,HEAT_EZ|PF13513.2|0.00028,HEAT_EZ|PF13513.2|0.16,HEAT_EZ|PF13513.2|3e+03,HEAT_EZ|PF13513.2|81,HEAT_EZ|PF13513.2|0.0068,HEAT_EZ|PF13513.2|1.2e+04,Vac14_Fab1_bd|PF12755.3|69,Vac14_Fab1_bd|PF12755.3|2.9e+02,Vac14_Fab1_bd|PF12755.3|9.7e+02,Vac14_Fab1_bd|PF12755.3|0.00011,Vac14_Fab1_bd|PF12755.3|3.8,Vac14_Fab1_bd|PF12755.3|27,Vac14_Fab1_bd|PF12755.3|41,IFRD|PF05004.9|0.068,IFRD|PF05004.9|49,IFRD|PF05004.9|9e-05,IFRD|PF05004.9|0.43,Cnd1|PF12717.3|6.6e+02,Cnd1|PF12717.3|0.039,Cnd1|PF12717.3|2.7,Cnd1|PF12717.3|45,Cnd1|PF12717.3|36,Adaptin_N|PF01602.16|1.1e+03,Adaptin_N|PF01602.16|0.00057,Adaptin_N|PF01602.16|0.0019,Adaptin_N|PF01602.16|1.3e+02,Adaptin_N|PF01602.16|3.4e+02,MMS19_C|PF12460.4|0.11,MMS19_C|PF12460.4|1.3e+02,MMS19_C|PF12460.4|1.8,MMS19_C|PF12460.4|1.1,MMS19_C|PF12460.4|1.9e+02,MMS19_C|PF12460.4|2.2e+02,MMS19_C|PF12460.4|1e+03,Cnd3|PF12719.3|6.2,Cnd3|PF12719.3|22,Cnd3|PF12719.3|0.27,Cnd3|PF12719.3|59,Cnd3|PF12719.3|1.5e+03,Cnd3|PF12719.3|1.3e+03,Cnd3|PF12719.3|1.7e+02,Cnd3|PF12719.3|5.1e+03,Arm|PF00514.19|8.2e+03,Arm|PF00514.19|4.3e+03,Arm|PF00514.19|1.3e+02,Arm|PF00514.19|0.008,Arm|PF00514.19|1.1e+03,Arm|PF00514.19|2.7e+02,Arm|PF00514.19|7.9e+02,IBN_N|PF03810.15|8.4e+02,IBN_N|PF03810.15|0.00021,IBN_N|PF03810.15|7.7e+02,IBN_N|PF03810.15|7.6e+03,IBN_N|PF03810.15|6e+02,RIX1|PF08167.8|1.4,RIX1|PF08167.8|2.1e+02,RIX1|PF08167.8|1.4,RIX1|PF08167.8|4.8e+02,RIX1|PF08167.8|13,RIX1|PF08167.8|8.8e+03 R_Transcript_17823:253-3603(+)
ATGGCGTCCGAGTTGACTCAGTTGCAACACGCACAAATGTCGGCGATTCTTGGACCCGATCCCACTCACTTCGAGACGCTAGTCTCTCACCTAATGTCCTCAAACAATGACCAACGTTCACAAGCAGAATCTCTCTACAATCTCTGCAAGCAACACCATCCTGATTCTCTCTCTCTCAAACTCGCTCATCTTCTCCGATCCTCTCCTCACCCTGAAGCTCGAGCTATGGCCGCTATTCTCCTAAGAAAGCTCCTAACTCGTGACGACTCGTACATATGGCCTCAGCTCAGTGCTTCGACTCAGTCTACTCTCAAATCGATCCTTCTAGGTTCTATTCAAAGAGAAGACGTCAAAACTATCTCCAAAAAGCTTTGCGATACTATTTCTGAACTTGCTGCTGGTATTTTGCCTGATAATGGATGGCCTGAGCTCTTGCCTTTTATGTTTCAGTGCGTTACTTCTGATAATCCGAAGCTTCGAGAATCTGCTCTTTTGATTTTCGCTCAATTAGCTCAGTACATTGGGGAAACCTTAATTCCTCACTTAGACACTTTGCATAACGTGTTTTTCCAGTGTTTAGGTTCCAGTTCAAGCCCCGACGTTCGGATTGCTGCTCTAGGTGCTACTATCAACTTCATTCAGTGCTTAAGCACCGCCTCAGATCGAGACAGGTTTCAGGATTTGCTCCCTCCTATGATGCAGACCCTAACGGAGGCCTTGAACTGTGGCCAAGAGGCTACAGCTCAAGAGGCTCTTGAATTGCTCATCGACTTGGCCGGGACTGAGCCGAGGTTTTTGAGGAGACAGTTGGTGGATGTTGTAGGTGCAATGTTGCAAATAGCTGAGGCTGACTCTCTTGAAGAAGGCACAAGGCACTTAGCTGTTGAGTTTGTTATAACCCTAGCTGAGGCTCGGGAACGAGCCCCTGGTATGATGAGGAAGTTGCCTCAGTTTATTCATAGGTTGTTTGCCATATTGATGAAGTTGTTGCTTGATATTGAGGATGATCCTGCTTGGCATGTTGCTGATACTGAGGATGAGGATGCTGGGGAGACGAGTAATTATAGTGTTGCTCAAGAGTGTTTGGATAGGTTGTCGATTTCGTTGGGTGGTAATACTATTGTACCTGTGGCTTCTGAGATGCTGCCTGTTCATTTGGCTGCTCCTGAGTGGCAAAAGCGGCATGCTGCTTTGATTTGTTTGGCCCAAATTGCTGAGGGATGTGCCAAGGTGATGATAAAGAATTTGGAACAAGTGGTGTCAATGGTCTTGAACTCTTTCAAAGACCCTCACCCTCGAGTGCGTTGGGCTGCCATTAATGCAATTGGTCAGCTGTCCACTGATTTAGGGCCAGATTTGCAAACTCAACATCATCATCGTGTCTTGCCCTCTTTGGCTTCAGCTATGGATGATTTTCAAAATCCCCGAGTGCAGGCACATGCTGCATCAGCTGTGTTGAACTTCAGTGAGAATTGCACCCCAGAGATTTTGACACCTTATTTAGATGGTATTGTGAGCAAACTGCTTGTCCTCCTTCAGAATGGCAAGCAAATGGTTCAGGAAGGGGCTTTGACTGCTTTAGCATCTGTTGCAGACTCTTCACAGGAGCTTTTCCAGAAGTATTATGATGCTGTTATGCCATACTTGAAGGCCATACTGGTGAATGCAACTGACAAATCCAATCGCATGCTTCGTGCAAAATCAATGGAATGTATCAGTTTGGTTGGAATGGCTGTTGGGAAGGATAAGTTTAGAGATGATGCTAAGCAGGTCATGGACGTTCTCATGCAGTTGCAAGGATCTCAAATGGAAGCAGATGATCCTACAACTAGCTATATGCTGCAGGCATGGGCAAGACTCTGCAAGTGCTTGGGTCAGGATTTTCTTCCTTATATGAGCATTGTTATGCCTCCACTCCTACAGTCTGCTCAGCTTAAGCCTGATGTTACAATCAAATCAGCAGATTCAGATGCTGATATTGATGAATCTGATGATGAAAGCATTGAGACCATTACTCTTGGAGATAGAAGGATTGGCATCAAGACCAGTGTTTTGGAGGAGAAAGCTACTGCTTGCAACATGTTATGTTGCTATGCTGATGAGCTGAAGGAAGGCTTCTTTCCATGGATTGATCAGGTAGCCACTACATTGGTTCCACTTCTTAAATTCTATTTTCATGAAGAAGTTAGAAAAGCAGCTGTTTCAGCTATGCCAGAGCTTCTGCGTGCTGCTAAATTAGCTGTTGAGAAGGGACTAGCTCAAGGTCGTAATGACGCTTATGTTAAGCAGTTAACTGATTATATAATACCTGCTTTGGTGGAGGCCTTACCTAAGGAACCTGAGATTGAGATTTGCTCAAACATGCTGGATGCCCTAAATGAGTGTGTACAGATTTCTGGACCTCTTCTGGATAAAAGCCAAGTAAAAAGCATAGTTGATGAGATAAAGCAAGTTATTACAGCCAGCTCCTCAAGAAGGGCGGAGAGAGCAGAAAGGACCAAAGCAGAGGATTTTGATGCAGAAGAAGGAGAACTTCTGAAGGAAGAAAATGAGCAAGAAGAGGAGCTTTTTGATCAGGTTGGTGATTGCTTGGGCACTTTAATCAAGACATTCAAGGCAGCTTTCTTGCCCTTCTTTGATGAGCTCTCCTCATACTTGACACCCATGTGGGGCAAGGATAAAACTGCAGAGGAAAGGAGGATTGCCATTTGTATATTTGATGATGTTGTGGAGCATTGTCGTGAAGCAGCACTCAGATACTATGATACCTTCCTTCCTTTCCTATTGGAAGCCTGCAACGATGAGAACCCAGATGTTCGACAGGCTGCTTTATATGGACTTGGTGTTTGTGCTGAGTTTGGTGGATCTGTATTTAAGCCTCTTGTTGGAGAGGCTCTATCAAGATTAAATGCTGTAATAAGGCATCCTAATGCTACACAATCTGAGAATGTAATGGCATATGACAATGCTGTTTCAGCTCTTGGGAAAATGTGCCAGTTCCATCGTGATAGCATAGATGCATCTCAGATTGTTCCTATGTGGTTGAATTGCTTGCCAATTAAAGGTGATCTGATTGAAGCAAAGGTTGTGCATGAACAACTATGTTCCTTGGTTGAGAGGTCTGATAGAGATTTATTAGGACCAAATAATCAGTATCTGCCAAGAATAGTGGCAGTATTTGCAGAGATTCTATGTGCAGGGAAAGATCTGGCATCGGAGCAAACCACAAGTCGAATGATCAATTTATTGAGGCAGCTTCAACAAACTCTGCCACCTTCTACCCTCGCATCAACCTGGTCCTCCCTTCAACCTCAGCAGCAGCTTGCTTTGCAGTCAATCCTCTCCCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17823.p1 GENE.R_Transcript_17823~~R_Transcript_17823.p1 ORF type:complete len:1117 (+),score=309.43,HEAT_2|PF13646.2|0.13,HEAT_2|PF13646.2|0.37,HEAT_2|PF13646.2|8.1,HEAT_2|PF13646.2|4.4e-10,HEAT_2|PF13646.2|4.2,HEAT_2|PF13646.2|9.5,HEAT_2|PF13646.2|0.0013,HEAT|PF02985.18|1.2e+04,HEAT|PF02985.18|38,HEAT|PF02985.18|0.035,HEAT|PF02985.18|1.2,HEAT|PF02985.18|6.4e+03,HEAT|PF02985.18|0.081,HEAT|PF02985.18|0.0011,HEAT|PF02985.18|8.2,HEAT|PF02985.18|2.9e+03,HEAT|PF02985.18|1.4e+02,HEAT|PF02985.18|1.2e+03,HEAT|PF02985.18|9e+03,HEAT|PF02985.18|1.3e-06,HEAT|PF02985.18|5.9e+02,HEAT_EZ|PF13513.2|9e+03,HEAT_EZ|PF13513.2|1.4e+02,HEAT_EZ|PF13513.2|10,HEAT_EZ|PF13513.2|0.37,HEAT_EZ|PF13513.2|4.7e+03,HEAT_EZ|PF13513.2|4.8e+03,HEAT_EZ|PF13513.2|6e+03,HEAT_EZ|PF13513.2|7.2e-06,HEAT_EZ|PF13513.2|2.4e+03,HEAT_EZ|PF13513.2|0.00028,HEAT_EZ|PF13513.2|0.16,HEAT_EZ|PF13513.2|3e+03,HEAT_EZ|PF13513.2|81,HEAT_EZ|PF13513.2|0.0068,HEAT_EZ|PF13513.2|1.2e+04,Vac14_Fab1_bd|PF12755.3|69,Vac14_Fab1_bd|PF12755.3|2.9e+02,Vac14_Fab1_bd|PF12755.3|9.7e+02,Vac14_Fab1_bd|PF12755.3|0.00011,Vac14_Fab1_bd|PF12755.3|3.8,Vac14_Fab1_bd|PF12755.3|27,Vac14_Fab1_bd|PF12755.3|41,IFRD|PF05004.9|0.068,IFRD|PF05004.9|49,IFRD|PF05004.9|9e-05,IFRD|PF05004.9|0.43,Cnd1|PF12717.3|6.6e+02,Cnd1|PF12717.3|0.039,Cnd1|PF12717.3|2.7,Cnd1|PF12717.3|45,Cnd1|PF12717.3|36,Adaptin_N|PF01602.16|1.1e+03,Adaptin_N|PF01602.16|0.00057,Adaptin_N|PF01602.16|0.0019,Adaptin_N|PF01602.16|1.3e+02,Adaptin_N|PF01602.16|3.4e+02,MMS19_C|PF12460.4|0.11,MMS19_C|PF12460.4|1.3e+02,MMS19_C|PF12460.4|1.8,MMS19_C|PF12460.4|1.1,MMS19_C|PF12460.4|1.9e+02,MMS19_C|PF12460.4|2.2e+02,MMS19_C|PF12460.4|1e+03,Cnd3|PF12719.3|6.2,Cnd3|PF12719.3|22,Cnd3|PF12719.3|0.27,Cnd3|PF12719.3|59,Cnd3|PF12719.3|1.5e+03,Cnd3|PF12719.3|1.3e+03,Cnd3|PF12719.3|1.7e+02,Cnd3|PF12719.3|5.1e+03,Arm|PF00514.19|8.2e+03,Arm|PF00514.19|4.3e+03,Arm|PF00514.19|1.3e+02,Arm|PF00514.19|0.008,Arm|PF00514.19|1.1e+03,Arm|PF00514.19|2.7e+02,Arm|PF00514.19|7.9e+02,IBN_N|PF03810.15|8.4e+02,IBN_N|PF03810.15|0.00021,IBN_N|PF03810.15|7.7e+02,IBN_N|PF03810.15|7.6e+03,IBN_N|PF03810.15|6e+02,RIX1|PF08167.8|1.4,RIX1|PF08167.8|2.1e+02,RIX1|PF08167.8|1.4,RIX1|PF08167.8|4.8e+02,RIX1|PF08167.8|13,RIX1|PF08167.8|8.8e+03 R_Transcript_17823:253-3603(+)
MASELTQLQHAQMSAILGPDPTHFETLVSHLMSSNNDQRSQAESLYNLCKQHHPDSLSLKLAHLLRSSPHPEARAMAAILLRKLLTRDDSYIWPQLSASTQSTLKSILLGSIQREDVKTISKKLCDTISELAAGILPDNGWPELLPFMFQCVTSDNPKLRESALLIFAQLAQYIGETLIPHLDTLHNVFFQCLGSSSSPDVRIAALGATINFIQCLSTASDRDRFQDLLPPMMQTLTEALNCGQEATAQEALELLIDLAGTEPRFLRRQLVDVVGAMLQIAEADSLEEGTRHLAVEFVITLAEARERAPGMMRKLPQFIHRLFAILMKLLLDIEDDPAWHVADTEDEDAGETSNYSVAQECLDRLSISLGGNTIVPVASEMLPVHLAAPEWQKRHAALICLAQIAEGCAKVMIKNLEQVVSMVLNSFKDPHPRVRWAAINAIGQLSTDLGPDLQTQHHHRVLPSLASAMDDFQNPRVQAHAASAVLNFSENCTPEILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQELFQKYYDAVMPYLKAILVNATDKSNRMLRAKSMECISLVGMAVGKDKFRDDAKQVMDVLMQLQGSQMEADDPTTSYMLQAWARLCKCLGQDFLPYMSIVMPPLLQSAQLKPDVTIKSADSDADIDESDDESIETITLGDRRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVATTLVPLLKFYFHEEVRKAAVSAMPELLRAAKLAVEKGLAQGRNDAYVKQLTDYIIPALVEALPKEPEIEICSNMLDALNECVQISGPLLDKSQVKSIVDEIKQVITASSSRRAERAERTKAEDFDAEEGELLKEENEQEEELFDQVGDCLGTLIKTFKAAFLPFFDELSSYLTPMWGKDKTAEERRIAICIFDDVVEHCREAALRYYDTFLPFLLEACNDENPDVRQAALYGLGVCAEFGGSVFKPLVGEALSRLNAVIRHPNATQSENVMAYDNAVSALGKMCQFHRDSIDASQIVPMWLNCLPIKGDLIEAKVVHEQLCSLVERSDRDLLGPNNQYLPRIVAVFAEILCAGKDLASEQTTSRMINLLRQLQQTLPPSTLASTWSSLQPQQQLALQSILSQ*

Click here to download the sequence:
Link to NCBI Protein BLAST