Transcript Information: R_Transcript_17832.p1


Annotated TAIR IDAT5G41270.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16507797-16508813 | Forward length=258
E-Value2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2534519697184
Replicate 22.8513494392503
Replicate 31.5553957627017
Condition 2: 8 Hour
Replicate 11.9649150883592
Replicate 21.9324218875099
Replicate 31.5686577079347
Condition 3: 24 Hour
Replicate 11.9840080320238
Replicate 22.0421536009794
Replicate 32.431967187433


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17832.p1 GENE.R_Transcript_17832~~R_Transcript_17832.p1 ORF type:complete len:162 (+),score=26.65,Rpr2|PF04032.12|9.4e-11 R_Transcript_17832:219-704(+)
ATGAGCAAGCGAGGAGGAGGTGCAACAACATCCTCATCTGGGCTTCTTCACAGTCACACACAACTCTCTCTTAGAGAAGAAGCCAGTGGGAGAAAGCAATCCCACAATCCTAAATCCATATTGAAACTCAAGCACCTCCAGAAGATAGCTCAGTGGGCTGCTTATGTTCCCTCTTTGGATTCCTTCTATGGCCGCCGTTTTGCTGAGTTTGGCGAGGCTCTGGGGATTTCCCCTGACCATTCTCTCTTTCCTTGCCAGAGATGCGAAACTATTCTTCAACCTGGTTTCAACTGTAGTGTCAGAATTGAAAAAAACCGAAGCAAGAAGAGGCGACGATGCAGCAAAACTAATTCACCTACACAAAATAATGTGGTTTGCAATTGCCACTTGTGTTGGCACCGGAACCTAAAAAGAGGGAGTCCTAAAGGTTACATAAGGGAGATGGCCCCCTTCAAAGACGAAAACCATTCAGAAGCCCAAAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17832.p1 GENE.R_Transcript_17832~~R_Transcript_17832.p1 ORF type:complete len:162 (+),score=26.65,Rpr2|PF04032.12|9.4e-11 R_Transcript_17832:219-704(+)
MSKRGGGATTSSSGLLHSHTQLSLREEASGRKQSHNPKSILKLKHLQKIAQWAAYVPSLDSFYGRRFAEFGEALGISPDHSLFPCQRCETILQPGFNCSVRIEKNRSKKRRRCSKTNSPTQNNVVCNCHLCWHRNLKRGSPKGYIREMAPFKDENHSEAQS*

Click here to download the sequence:
Link to NCBI Protein BLAST