Transcript Information: R_Transcript_178605.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value7E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0737035855717
Replicate 21.9087545832998
Replicate 32.0824306905593
Condition 2: 8 Hour
Replicate 11.4403449968968
Replicate 20.59788454120817
Replicate 30.6794720553086
Condition 3: 24 Hour
Replicate 11.5959972939046
Replicate 21.0614830482096
Replicate 30.93637239302234


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_178605.p1 GENE.R_Transcript_178605~~R_Transcript_178605.p1 ORF type:complete len:187 (+),score=30.53,zf-RVT|PF13966.2|1.3e+04,zf-RVT|PF13966.2|1.6e-15 R_Transcript_178605:3988-4548(+)
ATGGTCTTCTTTGCATGGACAAGAGTATGTCATAGCAAACAACAGGGAGGTTTAATTAACATCAAGGAAATTCTCAACTGGAACAAAAGCCTTGTTCTAAAATGGCTAGCAAAAATGCATATGGGGAGGAGCACCTTGTGGGAGGAATGGGTCAGCAAATACTACCTCAAAGGAGTATCCATCTGGGAAGTCAAGGCTCGACTAGGGGATTCTTGGGCCTGGAAGAACTTACTCAAGATCAGAGATGAATTTGTTTGTAAAGTAGGAGATATTCACTCAGGTGAGAAAGTCATTGCAAGCTGGGAAGCTACAGGTCACTTCACATCAAAGGCTTATGATTTCTTTCTTGATCAAAGAAAGAAAGTGGCTTGGGCTAAGGTTGTATGGGATCCAGTGAATACACCTAAGCATTTAGTGATTGCTACTTTGGCAATCCAGAATGCACTGCCAACAGTGGACAATCTGACCAGAAGAGAAATGTACTTGGTGAATAGATGCAGTCTGTGCAGACAGCAGCAAGAGCCAATCTCTCATTTGTTTTTTGAATGTCAATACACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_178605.p1 GENE.R_Transcript_178605~~R_Transcript_178605.p1 ORF type:complete len:187 (+),score=30.53,zf-RVT|PF13966.2|1.3e+04,zf-RVT|PF13966.2|1.6e-15 R_Transcript_178605:3988-4548(+)
MVFFAWTRVCHSKQQGGLINIKEILNWNKSLVLKWLAKMHMGRSTLWEEWVSKYYLKGVSIWEVKARLGDSWAWKNLLKIRDEFVCKVGDIHSGEKVIASWEATGHFTSKAYDFFLDQRKKVAWAKVVWDPVNTPKHLVIATLAIQNALPTVDNLTRREMYLVNRCSLCRQQQEPISHLFFECQYT*

Click here to download the sequence:
Link to NCBI Protein BLAST