Transcript Information: R_Transcript_178606.p3


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value4E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2777072668303
Replicate 21.4697410291409
Replicate 30.9162695038461
Condition 2: 8 Hour
Replicate 10.73457594841736
Replicate 20.22360881841186
Replicate 31.452128849631
Condition 3: 24 Hour
Replicate 10.91831228910816
Replicate 20.66165776671732
Replicate 30.21887704686897


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_178606.p3 GENE.R_Transcript_178606~~R_Transcript_178606.p3 ORF type:complete len:100 (+),score=17.69,RVT_1|PF00078.23|5.2e-13 R_Transcript_178606:3350-3649(+)
ATGGATGGTAAAGGTTATTTTAAGGGCAAATATGGCCTAAGGCAGGGTGATCCTCTCTCCCCTTACCTGTTTGTCCTCTGTATGGAGGGGCTTCCAAGGAGGCACAGAAGACTCGAGCAAATTTTAGGCTACTCTTTCTACCCAAAATGTGTTAGAGTGGGTCTTACTCATTTGGCATTTGCAAATGACTTGCTTCTATTCTGTAGAGGAGGAGATGTTCCTTATATCAGGGCAGCAATTGACTGTGTGAGTGGGTTTTCAAAGCAATCAGGTCTCTTCATAAATCCTCAGAAAAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_178606.p3 GENE.R_Transcript_178606~~R_Transcript_178606.p3 ORF type:complete len:100 (+),score=17.69,RVT_1|PF00078.23|5.2e-13 R_Transcript_178606:3350-3649(+)
MDGKGYFKGKYGLRQGDPLSPYLFVLCMEGLPRRHRRLEQILGYSFYPKCVRVGLTHLAFANDLLLFCRGGDVPYIRAAIDCVSGFSKQSGLFINPQKN*

Click here to download the sequence:
Link to NCBI Protein BLAST