Transcript Information: R_Transcript_17873.p1


Annotated TAIR IDAT2G44200.1
Annotated Gene NameCBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18276302-18278240 | Forward length=493
E-Value5.1E-132
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 153.472330550167
Replicate 248.929704494369
Replicate 347.377591636095
Condition 2: 8 Hour
Replicate 146.652584095522
Replicate 251.912708063017
Replicate 351.216328644748
Condition 3: 24 Hour
Replicate 152.236596621626
Replicate 246.976729839622
Replicate 348.982176127506


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17873.p1 GENE.R_Transcript_17873~~R_Transcript_17873.p1 ORF type:complete len:454 (+),score=114.44,Cir_N|PF10197.5|2.2e-15,Cir_N|PF10197.5|9.9e+02,Cir_N|PF10197.5|1.6e+04,Cir_N|PF10197.5|4.3e+03,Cir_N|PF10197.5|1.2e+04,Cir_N|PF10197.5|5.1e+03,CWC25|PF12542.4|8.8e+03,CWC25|PF12542.4|7.3e-13,CWC25|PF12542.4|1.6e+04 R_Transcript_17873:136-1497(+)
ATGGCGTTGAAGTTCTTAAACAAGAAAGGATGGCATACAGGAAGTCTTCGAAACATAGAAAACGTATGGAAAGCAGAGCAAAAGCACGACGCAGAGCAACGCAAATTAGAGGAGCTTCGTAAGCAGATTCAAGAGGAGAGAGAACGCGATGAGTTTCGTGAACTCCAACAGAAAGCCGGCCTTACTCCGAGGCAGGAAAGATTGGAATTTCTTTATGATTCTGGGCTGGCTGTTGGGAAATCAAGTTCTGATGGATTTAAGGCGCTTGAAGCTTATCCTCGTCCCGATAACTCGGCACCGGCTTCCGGTTCAGGTTCGGCACCGGCACCGGATTCTTCGAAGTCTGCTGTCCCTGGAGCCTTATTTGAAGATAAACCGCAATCTGCCAATGATTCATGGAGGAAGCTCCATTCAGATCCACTGCTGATGATTCGACAAAGGGAGCAAGAGGCTTTGGCAAGAATAAAGAACAACCCAGTGAAGATGGCCATGATTCGTAAATCTTTGGAAGCAAACAAGGATGATGGAGCTGTTGATGGGGAACGCCAGAAGGTCAAATCAAAACACAAAAAGCACTCCTCGACTAAGTACCATTCAGACTCGGAACATGATAGCCACGAAGAACAAGAAAAGAGGAAAAAGGCAAAGCATAAGAAGAAAGAACATCTAGAATCAGATGAGGACTCAAGGGAGAGAATAAGACATCATAGGCATTCCCGCAGGGACAACGGACGTGAAAGGCAGAGGCATAGAAGTCCATTGAAACAAAAGGCAGACCAAAATGAAGAAGATTCAAAAGATAGAACAAGGCATCATAGACATTCCCTGAAGGACTATGAAAGTGAAAAGCAACGACATAGCAGTCCATCAAAACGAAGAGAGAGAGTTGAAGATCATGAACGAAGCAAAAGAAGCTACGAGAAGTCCAAGAATGAGTACTACCGTGTGGACAGTCAGATAGATAAATCTGTCCACAAGCCAAAGGATAATGGTAGCTCATGTCAAGCAAGTGATTCCAATTATTCTGCTGTGCCACCTAGACCTGATTCACATAAACGTCGGGGTAGAGCTCCTCAGCTTTCTGAGGAAGAGAGAGCCGCTCGGTTGAGGGAGATGCAAATGGATGCTGAATTACATGAAGAACAAAGATGGAAAAGATTGAAGAAGGCTGATGAGGATGATGCACGTGAAGCAAGCCAGGCCGGTGCTTCTAGGGGAAGGTCATTTTTGGATGCTGTCCAAAAGAGTGTGTATGGCGCTGAAAAGGGTGGAAGCTCAACTATTGAGGAGAGTGTCCGTCGCCGTACCCATTTTCTCCAGGGTGGGAGAGAAGCCGATGAGCGCAATGCTTTCAGGAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17873.p1 GENE.R_Transcript_17873~~R_Transcript_17873.p1 ORF type:complete len:454 (+),score=114.44,Cir_N|PF10197.5|2.2e-15,Cir_N|PF10197.5|9.9e+02,Cir_N|PF10197.5|1.6e+04,Cir_N|PF10197.5|4.3e+03,Cir_N|PF10197.5|1.2e+04,Cir_N|PF10197.5|5.1e+03,CWC25|PF12542.4|8.8e+03,CWC25|PF12542.4|7.3e-13,CWC25|PF12542.4|1.6e+04 R_Transcript_17873:136-1497(+)
MALKFLNKKGWHTGSLRNIENVWKAEQKHDAEQRKLEELRKQIQEERERDEFRELQQKAGLTPRQERLEFLYDSGLAVGKSSSDGFKALEAYPRPDNSAPASGSGSAPAPDSSKSAVPGALFEDKPQSANDSWRKLHSDPLLMIRQREQEALARIKNNPVKMAMIRKSLEANKDDGAVDGERQKVKSKHKKHSSTKYHSDSEHDSHEEQEKRKKAKHKKKEHLESDEDSRERIRHHRHSRRDNGRERQRHRSPLKQKADQNEEDSKDRTRHHRHSLKDYESEKQRHSSPSKRRERVEDHERSKRSYEKSKNEYYRVDSQIDKSVHKPKDNGSSCQASDSNYSAVPPRPDSHKRRGRAPQLSEEERAARLREMQMDAELHEEQRWKRLKKADEDDAREASQAGASRGRSFLDAVQKSVYGAEKGGSSTIEESVRRRTHFLQGGREADERNAFRR*

Click here to download the sequence:
Link to NCBI Protein BLAST